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rifcsplowo2_01_scaffold_30182

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_30182_1
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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38..1072
-----------------
DNA (1035bp)
protein (345aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMT2_ARCVS
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:AKH98667.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source=
transposase IS116/IS110/IS902 family protein
rifcsplowo2_01_scaffold_30182_2

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1250..1669
-----------------
DNA (420bp)
protein (140aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor A1
rifcsplowo2_01_scaffold_30182_3
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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1803..3251
-----------------
DNA (1449bp)
protein (483aa)
aspA; aspartate ammonia-lyase; K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] id=5801961 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
aspartate ammonia-lyase (EC:4.3.1.1)
rifcsplowo2_01_scaffold_30182_4
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3251..4186
-----------------
DNA (936bp)
protein (312aa)
malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=CG_Syntroph_02
Malate dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3INY6_9PLAN
malate dehydrogenase
rifcsplowo2_01_scaffold_30182_5
Arabidopsis thaliana, Arabidopsis, Brassicales, rosids, Streptophyta, Viridiplantae

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4183..4944
-----------------
DNA (762bp)
protein (254aa)
serine peptidase (EC:3.4.21.-)
Putative esterase n=1 Tax=Arabidopsis thaliana RepID=Q8LCG1_ARATH
Putative esterase {ECO:0000313|EMBL:AAM63672.1}; TaxID=3702 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentap
rifcsplowo2_01_scaffold_30182_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4939..5508)
-----------------
DNA (570bp)
protein (190aa)
Glutamine amidotransferase subunit PdxT n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HUG9_9FIRM
Glutamine amidotransferase subunit PdxT Tax=AR11
glutamine amidotransferase subunit PdxT
rifcsplowo2_01_scaffold_30182_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5510..6031)
-----------------
DNA (522bp)
protein (174aa)
Spermine/spermidine N-acetyltransferase {ECO:0000313|EMBL:AEV97954.1}; EC=2.3.1.- {ECO:0000313|EMBL:AEV97954.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
Spermine/spermidine N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6V1_NIAKG
spermine/spermidine N-acetyltransferase
rifcsplowo2_01_scaffold_30182_8

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comp(6045..6875)
-----------------
DNA (831bp)
protein (277aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=uncultured candidate division JS1 bacterium RepID=G3BMP2_9BACT
pyridoxal biosynthesis lyase pdxS
rifcsplowo2_01_scaffold_30182_9
unknown

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6991..7077
-----------------
DNA (87bp)
protein (29aa)

This feature has no annotations

Displaying 9 items

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