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rifcsplowo2_01_scaffold_4685_16

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_10

near complete RP 33 / 55 MC: 6 BSCG 8 / 51 ASCG 33 / 38 MC: 4
Location: 7995..8864

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Pseudomonas fluorescens F113 RepID=G8PWE5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 185.0
  • Bit_score: 134
  • Evalue 2.10e-28
Diguanylate cyclase {ECO:0000313|EMBL:KDD66711.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 183.0
  • Bit_score: 138
  • Evalue 2.10e-29
diguanylate cyclase (GGDEF domain) with PAS/PAC sensor similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 185.0
  • Bit_score: 134
  • Evalue 6.00e-29

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Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCCAAAAAATATTGAAAATCTAATAAATGAGGTATTGGCAAGAGGCACTATCAGGAGAAAAGATTTAGATGATGGGCTGCTTGAATTTGAAGACCCCTTTGACAGGATCAGATATCTAACTGAAATGAGTTCTTTTGTTGATCTTAGGCTTGAAGGGACAAAGGTTGTAAGAGTTGAGGAGGGTGTGAGCGAGCGCCTGAGATGCCTGCAAAAAGAAGCCATAGAGCAAGCAAAGAAGATGACAAGTACCGACAGATTGACTGGAACATATAACAGAAACCACATTGATGGTGTTGCCAGGGAATTAAAGGATAGGTATGCTGTCCTAATGGTGGATATAGACAATTTTAAAAGAATAAATGATATTTACGGGCATACTGTAGGAGATATTGTAATAAAAAATGTAGCAAGAATAATTTTGCGGAACTTGAGAGAGTCCTATGTTGGCAGGTATGGCGGAGAGGAGTTTTATGTTGAGCTGAACAGGACCGACAAAGAAGGCGGCAGGGCCGCTGCTGAAAGAGTAAGAAAAGCTATTGAGGGAGAAGCCATTGGTTATTTGATTGATGACTTAAGAAGGGCAGGCATTCCAGTAACAGAAAGAATAAAGTCTGAGCGAATAACAGTCAGCATAGGAGTTGCTGACGAAAAGCAAGGCGAATTTCCTTACGATGCAAGGGTACGCGCGGATAATGCCCTATACCTAGCTAAAAAGTTTGGAAGAAATAAGGTATTGGGAGATGGAGATGATCCATTAAAATCACTTAATTGGAGACAAAAAGCAATGTTTTATGCTGCTGAAGAATTGGGAACTTTTGAGCAACTTATAAGAGCCGCGTCAGGAAGGATGAAATCTTACTTAAGATAA
PROTEIN sequence
Length: 290
MPKNIENLINEVLARGTIRRKDLDDGLLEFEDPFDRIRYLTEMSSFVDLRLEGTKVVRVEEGVSERLRCLQKEAIEQAKKMTSTDRLTGTYNRNHIDGVARELKDRYAVLMVDIDNFKRINDIYGHTVGDIVIKNVARIILRNLRESYVGRYGGEEFYVELNRTDKEGGRAAAERVRKAIEGEAIGYLIDDLRRAGIPVTERIKSERITVSIGVADEKQGEFPYDARVRADNALYLAKKFGRNKVLGDGDDPLKSLNWRQKAMFYAAEELGTFEQLIRAASGRMKSYLR*