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rifcsplowo2_01_scaffold_4685

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4685_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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405..1145
-----------------
DNA (741bp)
protein (247aa)
Transcriptional regulator, TrmB n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EFH2_PYRF1
transcriptional regulator TrmB Tax=RBG_16_Micrarchaeota_49_10_curated
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_4685_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1138..1476)
-----------------
DNA (339bp)
protein (113aa)
Transcription regulator AbrB/SpoV, predicted Tax=RBG_16_Euryarchaeota_68_12_curated
Transcription regulator AbrB/SpoV, predicted id=5041830 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4685_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1479..1730)
-----------------
DNA (252bp)
protein (84aa)
id=5041829 Tax=RBG_16_Euryarchaeota_68_12_curated
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4685_4
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

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1834..2667
-----------------
DNA (834bp)
protein (278aa)
putative archaeal kinase (sugar kinase superfamily); K06982 pantoate kinase [EC:2.7.1.169] Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6AE5C
kinase (sugar kinase superfamily)
rifcsplowo2_01_scaffold_4685_5
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

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2664..3395
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein; K09722 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
Pantothenate synthetase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BD84_9EURY
pantothenate synthetase
rifcsplowo2_01_scaffold_4685_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3390..4046)
-----------------
DNA (657bp)
protein (219aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=AR11
phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VP65_9EURY
rifcsplowo2_01_scaffold_4685_7
AR18, Woesearchaeaota, DPANN, Archaea

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comp(4071..4388)
-----------------
DNA (318bp)
protein (106aa)
transcriptional regulator PadR family transcriptional regulator id=5048283 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator PadR family transcriptional regulator Tax=AR18
transcriptional regulator PadR family transcriptional regulator
rifcsplowo2_01_scaffold_4685_8
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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4590..4928
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKK9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62254.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
rifcsplowo2_01_scaffold_4685_9
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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4939..5436
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DA4D7
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
hypothetical protein
rifcsplowo2_01_scaffold_4685_10

Not on your lists

5450..6073
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein id=5084327 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Uncharacterized protein {ECO:0000313|EMBL:KKS98073.1}; TaxID=1618443 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
hypothetical protein
rifcsplowo2_01_scaffold_4685_11
GWB2_OD1_ACD81_rel_46_69, Wolfebacteria, Parcubacteria, Bacteria

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6079..6408
-----------------
DNA (330bp)
protein (110aa)
rhodanese-like protein id=15190470 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Putative rhodanese-like protein {ECO:0000313|EMBL:KKU42301.1}; TaxID=1619009 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB2_46_69.;"
hypothetical protein
rifcsplowo2_01_scaffold_4685_12

Not on your lists

comp(6548..6853)
-----------------
DNA (306bp)
protein (102aa)
seg id=5043584 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46560.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_4685_13

Not on your lists

6960..7331
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein id=5043583 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46559.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_4685_14
unknown

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comp(7328..7504)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4685_15
unknown

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comp(7570..7725)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4685_16
Pseudomonas mandelii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7995..8864
-----------------
DNA (870bp)
protein (290aa)
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Pseudomonas fluorescens F113 RepID=G8PWE5_PSEFL
Diguanylate cyclase {ECO:0000313|EMBL:KDD66711.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii
diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
rifcsplowo2_01_scaffold_4685_17

Not on your lists

comp(8872..10431)
-----------------
DNA (1560bp)
protein (520aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
rifcsplowo2_01_scaffold_4685_18
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(10500..10847)
-----------------
DNA (348bp)
protein (116aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WP6_METBU
Uncharacterized protein {ECO:0000313|EMBL:KKW01651.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein
rifcsplowo2_01_scaffold_4685_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10874..13177)
-----------------
DNA (2304bp)
protein (768aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
subtilisin-like serine protease Tax=CG_Woesearch_02
subtilisin-like serine protease
rifcsplowo2_01_scaffold_4685_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13214..14245)
-----------------
DNA (1032bp)
protein (344aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
EF hand domain/PKD domain-containing protein Tax=AR11
Ig family protein
rifcsplowo2_01_scaffold_4685_21

Not on your lists

comp(14560..14925)
-----------------
DNA (366bp)
protein (122aa)
id=5049648 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53505.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Sucraseferredoxin family protein
rifcsplowo2_01_scaffold_4685_22
unknown

Not on your lists

15111..16211
-----------------
DNA (1101bp)
protein (367aa)
hypothetical protein
rifcsplowo2_01_scaffold_4685_23
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16364..16777)
-----------------
DNA (414bp)
protein (138aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionale
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SR72_9DELT
peptidylprolyl isomerase FKBP-type
rifcsplowo2_01_scaffold_4685_24
unknown

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17117..17791
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4685_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17861..19348)
-----------------
DNA (1488bp)
protein (496aa)
Oxidative cyclase id=5800341 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidative cyclase Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_4685_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19494..19841
-----------------
DNA (348bp)
protein (116aa)
id=5049683 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_4685_27
unknown

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19825..20085
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4685_28
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

20315..20920
-----------------
DNA (606bp)
protein (202aa)
phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=CG_PER_02
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] id=5098110 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
phosphatidylserine decarboxylase (EC:4.1.1.65)
rifcsplowo2_01_scaffold_4685_29
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20917..21474
-----------------
DNA (558bp)
protein (186aa)
Ribosomal RNA adenine methylase transferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICF6_FLUTR
ribosomal RNA adenine methylase transferase
Ribosomal RNA adenine methylase transferase {ECO:0000313|EMBL:AEA45426.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluvii
rifcsplowo2_01_scaffold_4685_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

21471..22541
-----------------
DNA (1071bp)
protein (357aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1B9_9GAMM
CDP-diacylglycerol/serine O-phosphatidyltransferase Tax=AR11
CDP-diacylglycerol/serine O-phosphatidyltransferase
Displaying items 1-30 of 35 in total

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