ggKbase home page

rifcsplowo2_01_scaffold_6402_37

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_10

near complete RP 33 / 55 MC: 6 BSCG 8 / 51 ASCG 33 / 38 MC: 4
Location: comp(24770..25048)

Top 3 Functional Annotations

Value Algorithm Source
rpoL; DNA-directed RNA polymerase, subunit L (EC:2.7.7.6); K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 92.0
  • Bit_score: 99
  • Evalue 2.60e-18
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 86.0
  • Bit_score: 91
  • Evalue 5.10e-16
DNA-directed RNA polymerase subunit L similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 87.0
  • Bit_score: 76
  • Evalue 4.70e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 279
ATGGAAATCAAAGTTCTCGACGACAAAAAAAACAAGCTTATTGTGGAAGTTAAAGGCGTTGACCATACATTATGTAATTCCCTTAAATCCGAGCTTTTGAATGACAAGCATGTCAAGATTGCAACTTACAGCATAAGGCACCCTCAGATAAGCCTGCCCCATATCATTGTCGAGACAGATGGGGAATTAAGCCCGAAAAATGCATTCATCAATGCTGTCCAGCGCCTTCATAAAATCAATGAAAAATTCAAGAAAGAATTCTCCTATGCGATAAGATAA
PROTEIN sequence
Length: 93
MEIKVLDDKKNKLIVEVKGVDHTLCNSLKSELLNDKHVKIATYSIRHPQISLPHIIVETDGELSPKNAFINAVQRLHKINEKFKKEFSYAIR*