ggKbase home page

rifcsplowo2_01_scaffold_27217

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_27217_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3..443)
-----------------
DNA (441bp)
protein (147aa)
Uracil-DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Uracil-DNA glycosylase id=2595301 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Uracil-DNA glycosylase
rifcsplowo2_01_scaffold_27217_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(404..1030)
-----------------
DNA (627bp)
protein (209aa)
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PP69_THESS
rifcsplowo2_01_scaffold_27217_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1027..1533)
-----------------
DNA (507bp)
protein (169aa)
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
DNA/pantothenate metabolism flavoprotein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z9A3_9XANT
rifcsplowo2_01_scaffold_27217_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1550..1945)
-----------------
DNA (396bp)
protein (132aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_27217_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1942..2529)
-----------------
DNA (588bp)
protein (196aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1A4_DESTD
rifcsplowo2_01_scaffold_27217_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(2552..2773)
-----------------
DNA (222bp)
protein (74aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PN20_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_27217_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(2844..3995)
-----------------
DNA (1152bp)
protein (384aa)
Lysine-2,3-aminomutase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDB3_9FIRM
lysine-2,3-aminomutase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
lysine-2,3-aminomutase
rifcsplowo2_01_scaffold_27217_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3992..4264)
-----------------
DNA (273bp)
protein (91aa)
MerR family regulatory protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
MerR family regulatory protein id=5019920 bin=GWA2_Elusimicrobia_69_24 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
DNA binding domain protein, excisionase family (fragment)
rifcsplowo2_01_scaffold_27217_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

4326..5234
-----------------
DNA (909bp)
protein (303aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Tetratricopeptide repeat protein id=1765621 bin=GWA2_Elusimicrobia_69_24 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase family protein
rifcsplowo2_01_scaffold_27217_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

5215..5883
-----------------
DNA (669bp)
protein (223aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Glycosyl transferase, family 39 id=4271038 bin=GWA2_Elusimicrobia_69_24 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase family protein
rifcsplowo2_01_scaffold_27217_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(5870..6937)
-----------------
DNA (1068bp)
protein (356aa)
radical SAM family protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Radical SAM family protein id=1843342 bin=GWA2_Elusimicrobia_66_18 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
radical SAM family protein
rifcsplowo2_01_scaffold_27217_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(6922..9123)
-----------------
DNA (2202bp)
protein (734aa)
squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=1843339 bin=GWA2_Elusimicrobia_66_18 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rifcsplowo2_01_scaffold_27217_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9184..9465)
-----------------
DNA (282bp)
protein (94aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNS4_SINAD
thiol-disulfide isomerase-like thioredoxin
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_27217_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9504..10202)
-----------------
DNA (699bp)
protein (233aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_27217_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(11287..11673)
-----------------
DNA (387bp)
protein (129aa)
CMP/dCMP deaminase, zinc-binding n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WL56_VEREI
CMP/dCMP deaminase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
CMP/dCMP deaminase
rifcsplowo2_01_scaffold_27217_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(11717..12544)
-----------------
DNA (828bp)
protein (276aa)
glycine oxidase (EC:1.4.3.19) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
glycine oxidase (EC:1.4.3.19) id=14429142 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
glycine oxidase (EC:1.4.3.19)
rifcsplowo2_01_scaffold_27217_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12603..12851)
-----------------
DNA (249bp)
protein (83aa)
glycine oxidase (EC:1.4.3.19) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_27217_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12854..13237)
-----------------
DNA (384bp)
protein (128aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_27217_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(13234..13755)
-----------------
DNA (522bp)
protein (174aa)
nucleoside diphosphate kinase ; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Nucleoside diphosphate kinase id=2845727 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
nucleoside diphosphate kinase
rifcsplowo2_01_scaffold_27217_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

14094..14303
-----------------
DNA (210bp)
protein (70aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Cold-shock DNA-binding domain protein id=3978806 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cold-shock DNA-binding domain-containing protein
rifcsplowo2_01_scaffold_27217_21
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(14432..15646)
-----------------
DNA (1215bp)
protein (405aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-)
RNA helicase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B67492
DEAD/DEAH box helicase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
Displaying 21 items

View Taxonomy