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rifcsplowo2_01_scaffold_33301

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_33301_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

1..795
-----------------
DNA (795bp)
protein (265aa)
putative glycolate oxidase (EC:1.1.2.4)
FAD/FMN-containing dehydrogenase id=3285658 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
HMM--K11472
rifcsplowo2_01_scaffold_33301_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

792..2066
-----------------
DNA (1275bp)
protein (425aa)
HMM--K11473
Putative uncharacterized protein id=1801947 bin=GWB2_Elusimicrobia_63_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
glcF; glycolate oxidase iron-sulfur subunit GlcF
rifcsplowo2_01_scaffold_33301_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2063..3091
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CY66_PAESJ
HMM--K07282
protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
rifcsplowo2_01_scaffold_33301_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3067..3567)
-----------------
DNA (501bp)
protein (167aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000375E50B
HMM--K03770
rifcsplowo2_01_scaffold_33301_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3579..3758)
-----------------
DNA (180bp)
protein (60aa)
HMM--K03770
rifcsplowo2_01_scaffold_33301_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3796..4272
-----------------
DNA (477bp)
protein (159aa)
rifcsplowo2_01_scaffold_33301_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4250..4645)
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein
Integral membrane protein CcmA involved in cell shape determination id=4409580 bin=GWA2_Elusi-like_A8_64_40 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
rifcsplowo2_01_scaffold_33301_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4645..5784)
-----------------
DNA (1140bp)
protein (380aa)
Metalloendopeptidase-like membrane protein id=4938032 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Peptidase M23
HMM--K08259
rifcsplowo2_01_scaffold_33301_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

5891..6358
-----------------
DNA (468bp)
protein (156aa)
Ferric uptake regulator, Fur family id=3841820 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HMM--K03711
ferric-uptake regulator
rifcsplowo2_01_scaffold_33301_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6355..6549
-----------------
DNA (195bp)
protein (65aa)
rifcsplowo2_01_scaffold_33301_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6552..7748
-----------------
DNA (1197bp)
protein (399aa)
Uncharacterized protein id=4493020 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
rifcsplowo2_01_scaffold_33301_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

7732..8310
-----------------
DNA (579bp)
protein (193aa)
Lipoprotein id=4493012 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
HMM--K03612
rifcsplowo2_01_scaffold_33301_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

8300..9952
-----------------
DNA (1653bp)
protein (551aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BNS0_9FIRM
HMM--K03734
thiamine biosynthesis lipoprotein ApbE
rifcsplowo2_01_scaffold_33301_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

9945..10190
-----------------
DNA (246bp)
protein (82aa)
Small GTP-binding protein id=2936245 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
small GTP-binding protein domain-containing protein
HMM--K04759
Displaying 14 items

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