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rifcsplowo2_01_scaffold_13367

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13367_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3..860)
-----------------
DNA (858bp)
protein (286aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=TGT_DESAP
rifcsplowo2_01_scaffold_13367_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

924..2780
-----------------
DNA (1857bp)
protein (619aa)
GTP-binding protein TypA; K06207 GTP-binding protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
GTP-binding protein TypA id=2217350 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
GTP-binding protein TypA
rifcsplowo2_01_scaffold_13367_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2818..3312
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=4189572 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
rifcsplowo2_01_scaffold_13367_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3467..3733)
-----------------
DNA (267bp)
protein (89aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=2719110 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
rifcsplowo2_01_scaffold_13367_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3743..5557)
-----------------
DNA (1815bp)
protein (605aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_13367_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(5554..5871)
-----------------
DNA (318bp)
protein (106aa)
cutA; periplasmic divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Periplasmic divalent cation tolerance protein id=2010395 bin=GWB2_CP_45_9 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
CutA1 divalent ion tolerance protein
rifcsplowo2_01_scaffold_13367_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

5904..6950
-----------------
DNA (1047bp)
protein (349aa)
pepQ; Xaa-Pro dipeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Xaa-Pro aminopeptidase id=3467644 bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
pepQ; Xaa-Pro dipeptidase
rifcsplowo2_01_scaffold_13367_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6966..7523
-----------------
DNA (558bp)
protein (186aa)
Elongation factor P n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=EFP_UNCTG
elongation factor P ; K02356 elongation factor P Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
elongation factor P
rifcsplowo2_01_scaffold_13367_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

7523..8002
-----------------
DNA (480bp)
protein (160aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUB5_CHIPD
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
acetyl-CoA carboxylase, biotin carboxyl carrier protein
rifcsplowo2_01_scaffold_13367_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

8103..9251
-----------------
DNA (1149bp)
protein (383aa)
biotin carboxylase ; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Biotin carboxylase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZI8_UNCTG
biotin carboxylase
rifcsplowo2_01_scaffold_13367_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

9205..9717
-----------------
DNA (513bp)
protein (171aa)
bifunctional protein HldE (EC:2.7.7.- 2.7.1.-)
Bifunctional protein HldE n=1 Tax=Campylobacter curvus (strain 525.92) RepID=HLDE_CAMC5
ADP-heptose synthase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_13367_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

9701..10135
-----------------
DNA (435bp)
protein (145aa)
Thiamine-phosphate synthase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XA31_9CHRO
thiamine-phosphate diphosphorylase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
thiamine-phosphate diphosphorylase
rifcsplowo2_01_scaffold_13367_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

10117..10767
-----------------
DNA (651bp)
protein (217aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Thermosynechococcus elongatus RepID=THIE_THEEB
rifcsplowo2_01_scaffold_13367_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

10764..11681
-----------------
DNA (918bp)
protein (306aa)
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Homoserine kinase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0E3_9FIRM
homoserine kinase
rifcsplowo2_01_scaffold_13367_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

11678..12919
-----------------
DNA (1242bp)
protein (414aa)
aspartate kinase ; K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Aspartokinase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYX2_UNCTG rbh
aspartate kinase
rifcsplowo2_01_scaffold_13367_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

12916..14496
-----------------
DNA (1581bp)
protein (527aa)
putative (R)-citramalate synthase ; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=4923738 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
putative (R)-citramalate synthase
rifcsplowo2_01_scaffold_13367_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

14584..15450
-----------------
DNA (867bp)
protein (289aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQF7_9BACT
rifcsplowo2_01_scaffold_13367_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

15513..16145
-----------------
DNA (633bp)
protein (211aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IRE2_THEET
rifcsplowo2_01_scaffold_13367_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

16200..17843
-----------------
DNA (1644bp)
protein (548aa)
ilvB; acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Acetolactate synthase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYS6_UNCTG
acetolactate synthase large subunit
rifcsplowo2_01_scaffold_13367_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

17840..18403
-----------------
DNA (564bp)
protein (188aa)
Acetolactate synthase, small subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBZ9_9EURY
acetolactate synthase, small subunit Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
acetolactate synthase, small subunit
rifcsplowo2_01_scaffold_13367_21
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

18396..19382
-----------------
DNA (987bp)
protein (329aa)
ketol-acid reductoisomerase ; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Ketol-acid reductoisomerase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYS4_UNCTG
ketol-acid reductoisomerase
rifcsplowo2_01_scaffold_13367_22
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


19476..20804
-----------------
DNA (1329bp)
protein (443aa)
protein translocase subunit SecY ; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Protein translocase subunit SecY id=4607836 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
protein translocase subunit SecY
rifcsplowo2_01_scaffold_13367_23
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

20817..21476
-----------------
DNA (660bp)
protein (220aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTG9_ACEAZ
rifcsplowo2_01_scaffold_13367_24
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

21445..22209
-----------------
DNA (765bp)
protein (255aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Methionine aminopeptidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1L6_9FIRM
methionine aminopeptidase
rifcsplowo2_01_scaffold_13367_25
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

22213..22467
-----------------
DNA (255bp)
protein (85aa)
Translation initiation factor IF-1 n=1 Tax=Leptonema illini DSM 21528 RepID=H2CAP8_9LEPT
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
translation initiation factor IF-1
rifcsplowo2_01_scaffold_13367_26
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

22464..22577
-----------------
DNA (114bp)
protein (38aa)
rpmJ; 50S ribosomal protein L36 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
50S ribosomal protein L36 id=1710476 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
rpmJ; large subunit ribosomal protein L36
rifcsplowo2_01_scaffold_13367_27
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


22592..22993
-----------------
DNA (402bp)
protein (134aa)
30S ribosomal protein S13 n=2 Tax=Desulfotomaculum RepID=F6B5R8_DESCC
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
30S ribosomal protein S13
rifcsplowo2_01_scaffold_13367_28
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


23011..23439
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S11 ; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
30S ribosomal protein S11 id=3762493 bin=GWA2_Elusimicrobia_69_24 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S11
rifcsplowo2_01_scaffold_13367_29
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


23489..24076
-----------------
DNA (588bp)
protein (196aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
30S ribosomal protein S4 id=2052071 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rpsD; 30S ribosomal protein S4
rifcsplowo2_01_scaffold_13367_30
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

24107..25069
-----------------
DNA (963bp)
protein (321aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
DNA-directed RNA polymerase subunit alpha id=4607941 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
DNA-directed RNA polymerase subunit alpha
Displaying items 1-30 of 36 in total

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