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rifcsplowo2_01_scaffold_12424

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12424_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

1..387
-----------------
DNA (387bp)
protein (129aa)
methionine synthase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5D47E
metH; 5-methyltetrahydrofolate-homocysteine S-methyltransferase, cobalamin-dependent methionine synthase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
metH; 5-methyltetrahydrofolate-homocysteine S-methyltransferase, cobalamin-dependent methionine synthase
rifcsplowo2_01_scaffold_12424_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(377..1486)
-----------------
DNA (1110bp)
protein (370aa)
CinA-like protein n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=CINAL_UNCTG
CinA-like protein ; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
CinA-like protein
rifcsplowo2_01_scaffold_12424_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1635..1946)
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Uncharacterized protein id=4883440 bin=GWA2_Elusimicrobia_69_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
rifcsplowo2_01_scaffold_12424_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1943..2116)
-----------------
DNA (174bp)
protein (58aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(2159..2758)
-----------------
DNA (600bp)
protein (200aa)
mcrA; Restriction endonuclease, McrA/HNH family Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
HNH endonuclease id=5032465 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
mcrA; Restriction endonuclease, McrA/HNH family
rifcsplowo2_01_scaffold_12424_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(2798..3460)
-----------------
DNA (663bp)
protein (221aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3524..5494)
-----------------
DNA (1971bp)
protein (657aa)
uncharacterized LOC100333420 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=4304130 bin=GWC2_Elusimicrobia_64_44 species=Leishmania major genus=Leishmania taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
rifcsplowo2_01_scaffold_12424_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(5516..8407)
-----------------
DNA (2892bp)
protein (964aa)
Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila (strain SB210) RepID=Q22WK5_TETTS
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_12424_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(8424..10019)
-----------------
DNA (1596bp)
protein (532aa)
Trichohyalin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FHD4_TRIVA
trichohyalin Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_12424_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(10206..12050)
-----------------
DNA (1845bp)
protein (615aa)
trichohyalin Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Flagellar motor switch protein FliG id=4349341 bin=GWA2_Elusimicrobia_56_46 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
flagellar motor switch protein FliG
rifcsplowo2_01_scaffold_12424_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12047..13426)
-----------------
DNA (1380bp)
protein (460aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Tetratricopeptide TPR_1 repeat-containing protein id=4701952 bin=GWA2_Elusi_like_61_42 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
rifcsplowo2_01_scaffold_12424_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(13612..13998)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Uncharacterized protein id=2009848 bin=GWE2_RBX1_39_32 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
rifcsplowo2_01_scaffold_12424_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(14423..15205)
-----------------
DNA (783bp)
protein (261aa)
fructose-1,6-bisphosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
inositol-phosphate phosphatase n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B790AB
histidinol phosphate phosphatase
rifcsplowo2_01_scaffold_12424_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(15202..15948)
-----------------
DNA (747bp)
protein (249aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D79_SOLUE
rifcsplowo2_01_scaffold_12424_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


comp(15935..16726)
-----------------
DNA (792bp)
protein (264aa)
KsgA; dimethyladenosine transferase (rRNA methylation); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Ribosomal RNA small subunit methyltransferase A id=2106784 bin=GWA2_Elusimicrobia_69_24 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Ribosomal RNA small subunit methyltransferase A
rifcsplowo2_01_scaffold_12424_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

16746..17579
-----------------
DNA (834bp)
protein (278aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(17455..19290)
-----------------
DNA (1836bp)
protein (612aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=4990778 bin=GWA2_Elusi_like_61_42 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Protein of unknown function, membrane YfhO
rifcsplowo2_01_scaffold_12424_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


comp(19446..21953)
-----------------
DNA (2508bp)
protein (836aa)
DNA gyrase subunit A ; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
DNA gyrase subunit A id=3176917 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good rbh
DNA gyrase subunit A
rifcsplowo2_01_scaffold_12424_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

22108..22671
-----------------
DNA (564bp)
protein (188aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(22675..23583)
-----------------
DNA (909bp)
protein (303aa)
chorismate synthase (EC:4.2.3.5) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W052_9CYAN
rifcsplowo2_01_scaffold_12424_21
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(23906..24646)
-----------------
DNA (741bp)
protein (247aa)
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
shikimate 5-dehydrogenase (EC:1.1.1.25)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000364D1E6
rifcsplowo2_01_scaffold_12424_22
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(24691..26052)
-----------------
DNA (1362bp)
protein (454aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ83_9FIRM
peptidase U62; K03592 PmbA protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
peptidase U62
rifcsplowo2_01_scaffold_12424_23
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(26059..26586)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein id=1756904 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_24
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(26610..27578)
-----------------
DNA (969bp)
protein (323aa)
yfhQ; putative A/G-specific adenine glycosylase YfhQ (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E4T2_9BACL
A/G-specific adenine glycosylase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_25
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(27575..28144)
-----------------
DNA (570bp)
protein (190aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_12424_26
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(28134..28481)
-----------------
DNA (348bp)
protein (116aa)
id=4910139 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
id=4910139 bin=GWC2_Elusimicrobia_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Displaying 26 items

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