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rifcsplowo2_01_scaffold_9158

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9158_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

64..1326
DNA (1263bp) protein (421aa)
Histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLY6_GEOS8
histidine kinase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
response receiver histidine kinase response regulator
rifcsplowo2_01_scaffold_9158_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

1301..1708
DNA (408bp) protein (136aa)
PhoP family transcriptional regulator n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B49AB4
winged helix family two component transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
winged helix family two component transcriptional regulator
rifcsplowo2_01_scaffold_9158_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

1698..2096
DNA (399bp) protein (133aa)
response regulator receiver protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
two component system response regulator id=15192141 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
response regulator receiver protein
rifcsplowo2_01_scaffold_9158_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2096..2476
DNA (381bp) protein (127aa)
Response regulator receiver protein n=1 Tax=uncultured bacterium RepID=K2AKT7_9BACT
two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
two component transcriptional regulator
rifcsplowo2_01_scaffold_9158_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2490..3701
DNA (1212bp) protein (404aa)
MiaB family RNA modification protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RNA modification enzyme, MiaB family id=4489026 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MiaB family RNA modification protein
rifcsplowo2_01_scaffold_9158_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3726..4073
DNA (348bp) protein (116aa)
Histidine triad (HIT) protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y8I0_THEBD
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
histidine triad (HIT) protein
rifcsplowo2_01_scaffold_9158_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

4118..4312
DNA (195bp) protein (65aa)
30S ribosomal protein S21 ; K02970 small subunit ribosomal protein S21 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
30S ribosomal protein S21 id=2313667 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
30S ribosomal protein S21
rifcsplowo2_01_scaffold_9158_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

4338..6110
DNA (1773bp) protein (591aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
DNA primase id=2201815 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
DNA primase
rifcsplowo2_01_scaffold_9158_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6107..7876
DNA (1770bp) protein (590aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RNA polymerase sigma factor id=4489131 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RpoD subfamily RNA polymerase sigma-70 subunit
rifcsplowo2_01_scaffold_9158_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(7856..9070)
DNA (1215bp) protein (405aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=1917986 bin=GWA2_Elusimicrobia_51_34 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
two component, sigma54 specific, Fis family transcriptional regulator
rifcsplowo2_01_scaffold_9158_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9063..9716)
DNA (654bp) protein (218aa)
signal transduction histidine kinase; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Signal transduction histidine kinase, nitrogen specific, NtrB id=3978716 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
signal transduction histidine kinase
rifcsplowo2_01_scaffold_9158_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9847..10248)
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_9158_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(10322..11011)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA280-P20 RepID=UPI000378E8E2
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_1
winged helix family two component transcriptional regulator
rifcsplowo2_01_scaffold_9158_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(11049..12479)
DNA (1431bp) protein (477aa)
peptidoglycan-binding lysin domain-containing protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Peptidoglycan-binding LysM id=1982610 bin=GWA2_Elusi_like_61_42 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
peptidoglycan-binding lysin domain-containing protein
rifcsplowo2_01_scaffold_9158_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12476..12937)
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=4740735 bin=GWC2_Elusimicrobia_64_44 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
rifcsplowo2_01_scaffold_9158_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(13066..14382)
DNA (1317bp) protein (439aa)
glycoside hydrolase family 16 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=4483293 bin=GWA2_Elusi-like_A8_64_40 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
glycoside hydrolase family 16
rifcsplowo2_01_scaffold_9158_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(14348..15310)
DNA (963bp) protein (321aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_9158_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(15649..15738)
DNA (90bp) protein (30aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_9158_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(15744..16142)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_9158_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(16310..17494)
DNA (1185bp) protein (395aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein id=3461541 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
transcriptional regulator
rifcsplowo2_01_scaffold_9158_21
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(17491..18147)
DNA (657bp) protein (219aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
rifcsplowo2_01_scaffold_9158_22
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(18144..19553)
DNA (1410bp) protein (470aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein id=4803154 bin=GWA2_Elusimicrobia_69_24 species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Displaying 22 items

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