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RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231

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Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_1
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(1..678)
DNA (678bp) protein (226aa)
Marine sediment metagenome DNA, contig: S01H4_C02073 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_2
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

1322..1531
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_3
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

1540..1896
DNA (357bp) protein (119aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_4
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

2010..3632
DNA (1623bp) protein (541aa)
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=12555627 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
IMP cyclohydrolase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
IMP cyclohydrolase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_5
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

3580..6618
DNA (3039bp) protein (1013aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AAR0_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_6
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

7165..8232
DNA (1068bp) protein (356aa)
von Willebrand factor type A Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
S-layer-like domain-containing protein id=13189 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
von Willebrand factor type A
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_7
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

8425..8820
DNA (396bp) protein (132aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0T1_ACIFD
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_8
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


8870..9994
DNA (1125bp) protein (375aa)
phenylalanine-trna synthetase-like protein (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003827B7C
phenylalanyl-tRNA synthetase alpha chain
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_9
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

10043..12070
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361FCA2
DNA gyrase subunit B Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
gyrB; DNA gyrase subunit B
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_10
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

12284..12898
DNA (615bp) protein (205aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_11
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

13000..13425
DNA (426bp) protein (142aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_12
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

13425..16286
DNA (2862bp) protein (954aa)
Kelch repeat-containing protein n=1 Tax=bacterium Ellin514 RepID=B9XJB4_9BACT id=133278 bin=ACD81 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
peptidase C10 streptopain Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_13
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

16297..16719
DNA (423bp) protein (141aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_14
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

16807..16995
DNA (189bp) protein (63aa)
Protein translocase subunit SecE n=1 Tax=uncultured bacterium RepID=K2ATM4_9BACT
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
preprotein translocase subunit SecE
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_15
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

16999..17544
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=96199 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nusG; transcription antitermination factor
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_16
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


17554..17976
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=RL11_SYNJB
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
rplK; 50S ribosomal protein L11
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_17
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


17978..18610
DNA (633bp) protein (211aa)
50S ribosomal protein L1 n=1 Tax=uncultured bacterium RepID=K2DT95_9BACT
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
rplA; 50S ribosomal protein L1
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_18
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

18747..19355
DNA (609bp) protein (203aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_19
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

19422..19979
DNA (558bp) protein (186aa)
dcd1; dCTP deaminase (dUMP-forming) (EC:3.5.4.30); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI000371785A
deoxycytidine triphosphate deaminase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_20
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

19976..20644
DNA (669bp) protein (223aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Thymidylate kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY20_9BACT
thymidylate kinase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_21
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

20631..21278
DNA (648bp) protein (216aa)
UPI0003CFACF1 related cluster n=1 Tax=unknown RepID=UPI0003CFACF1
hypothetical protein
UPI0003CFACF1 related cluster Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_22
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

21278..21733
DNA (456bp) protein (152aa)
Histidine triad domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D417_9FIRM
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
histidine triad (HIT) protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_23
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

21723..22673
DNA (951bp) protein (317aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K2BWW8_9BACT
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_24
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

22670..23080
DNA (411bp) protein (137aa)
ADP-ribose pyrophosphatase
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_25
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

23103..23582
DNA (480bp) protein (160aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=uncultured bacterium RepID=K1Z356_9BACT
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_26
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

23650..24237
DNA (588bp) protein (196aa)
Metal dependent phosphohydrolase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRC6_METTR id=137939 bin=ACD9 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
hydrolase; K07023 putative hydrolases of HD superfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hydrolase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_27
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

24224..24412
DNA (189bp) protein (63aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_28
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

24409..25095
DNA (687bp) protein (229aa)
putative phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035F2738
phosphatase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_29
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(25051..25275)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_231_30
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

25364..25675
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VYV0_9BACT id=84020 bin=ACD56 species=Prevotella timonensis genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Putative uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Displaying items 1-30 of 96 in total

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