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RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_1
R_SM2F11_48_13, SM2F11, Bacteria

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1..678
-----------------
DNA (678bp)
protein (226aa)
pilus assembly protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5D320
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
General secretion pathway protein G
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_2
R_OD1_Nomurabacteria_39_17, Nomurabacteria, Parcubacteria, Bacteria

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705..1199
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0K9_9BACT
fimbrial protein pilA
PilE-like protein; K02655 type IV pilus assembly protein PilE Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_17_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_3
R_SM2F11_48_13, SM2F11, Bacteria

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1343..1480
-----------------
DNA (138bp)
protein (46aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_4
R_SM2F11_48_13, SM2F11, Bacteria

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1488..1685
-----------------
DNA (198bp)
protein (66aa)
id=5094763 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=5094763 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_5
R_SM2F11_48_13, SM2F11, Bacteria

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1794..2354
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E383_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2367..2984
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003617EBA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2985..3596
-----------------
DNA (612bp)
protein (204aa)
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
N-terminal methylation motif domain-containing protein id=5803349 bin=OD1_GWC2_34_28 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Type II secretion system protein G
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_8
R_SM2F11_48_13, SM2F11, Bacteria

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3706..3996
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSV9_9CHLB
hypothetical protein; K09803 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3993..4277
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D1W0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4355..4906
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
gspG; general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_11
R_SM2F11_48_13, SM2F11, Bacteria

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4961..5437
-----------------
DNA (477bp)
protein (159aa)
transmembrane_regions 17..39 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 17..39 id=27588 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_12
R_SM2F11_48_13, SM2F11, Bacteria

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5415..5822
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003689951
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5912..6436
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
id=2733824 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=2733824 bin=GWC2_OP3-like_45_7 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_14
R_SM2F11_48_13, SM2F11, Bacteria

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6479..7990
-----------------
DNA (1512bp)
protein (504aa)
Two-component hybrid sensor and regulator n=1 Tax=uncultured bacterium RepID=K2DLC7_9BACT
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
multi-sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7987..8385
-----------------
DNA (399bp)
protein (133aa)
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
response regulator receiver protein id=14424053 bin=bin11_novelCP species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8390..10576
-----------------
DNA (2187bp)
protein (729aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=uncultured bacterium RepID=K2AH56_9BACT
Ig-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Ig-like domain-containing protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10577..10855
-----------------
DNA (279bp)
protein (93aa)
Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9K9_9FIRM id=13356 bin=ACD18 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hupB; DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hupB; DNA-binding protein HU-beta
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11006..11437
-----------------
DNA (432bp)
protein (144aa)
id=4731916 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=4731916 bin=GWC2_OD1_43_27 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_19
R_SM2F11_48_13, SM2F11, Bacteria

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11441..12061
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2R0_THEOJ
hypothetical protein; K06384 stage II sporulation protein M Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_20
R_SM2F11_48_13, SM2F11, Bacteria

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12042..12368
-----------------
DNA (327bp)
protein (109aa)
ybaZ; ybaZ protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801358 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9324_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13024..16296
-----------------
DNA (3273bp)
protein (1091aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Displaying 21 items

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