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RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_1
R_SM2F11_48_13, SM2F11, Bacteria

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comp(3..908)
-----------------
DNA (906bp)
protein (302aa)
Glycosyl transferase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIP7_METNJ
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_2
R_SM2F11_48_13, SM2F11, Bacteria

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comp(892..1491)
-----------------
DNA (600bp)
protein (200aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=71894 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_3
R_SM2F11_48_13, SM2F11, Bacteria

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comp(1491..3200)
-----------------
DNA (1710bp)
protein (570aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
arginyl-tRNA synthetase n=1 Tax=[Clostridium] glycolicum RepID=UPI0003748FEF
argS; arginyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3197..3646)
-----------------
DNA (450bp)
protein (150aa)
ssrA-binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=71404 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded DNA-binding protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_5
R_SM2F11_48_13, SM2F11, Bacteria

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comp(3679..4308)
-----------------
DNA (630bp)
protein (210aa)
Peptidase M23 n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PL30_MEIRD
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
peptidase M23
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4355..5335
-----------------
DNA (981bp)
protein (327aa)
Na+/Ca+ antiporter, CaCA family; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Na+/Ca+ antiporter, CaCA family
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(5943..6290)
-----------------
DNA (348bp)
protein (116aa)
50S ribosomal protein L20P; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=71403 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
rplT; 50S ribosomal protein L20
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6294..6488)
-----------------
DNA (195bp)
protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6589..7014)
-----------------
DNA (426bp)
protein (142aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Translation initiation factor IF-3 id=3091483 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
translation initiation factor IF-3
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7190..9787)
-----------------
DNA (2598bp)
protein (866aa)
TPR repeats containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801305 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tetratricopeptide TPR_2
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10319..11989
-----------------
DNA (1671bp)
protein (557aa)
S-layer domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XEP6_THEPJ
S-layer protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
S-layer protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_14518_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11990..12421
-----------------
DNA (432bp)
protein (144aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying 12 items

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