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RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_1
R_SM2F11_48_13, SM2F11, Bacteria

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comp(2..913)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F0DCC
concanavalin A-like lectin/glucanase superfamily Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RHS repeat-associated core domain-containing protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_2
R_SM2F11_48_13, SM2F11, Bacteria

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1019..1393
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622DB7
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_3
R_SM2F11_48_13, SM2F11, Bacteria

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1411..1746
DNA (336bp) protein (112aa)
Rhodanese-like protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLC9_PLABD
rhodanese-like protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rhodanese-like protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_4
R_SM2F11_48_13, SM2F11, Bacteria

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1926..2231
DNA (306bp) protein (102aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
groES; co-chaperonin GroES; K04078 chaperonin GroES id=53261 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
groES; co-chaperonin GroES
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_5
R_SM2F11_48_13, SM2F11, Bacteria

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2250..3914
DNA (1665bp) protein (555aa)
chaperonin Cpn60 ; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801477 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
chaperonin Cpn60
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_6
Parcubacteria bacterium GW2011_GWA2_52_8, Parcubacteria, Bacteria

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4044..5234
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=uncultured bacterium RepID=K2BRA4_9BACT
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKW28823.1}; TaxID=1618857 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_52_8.;"
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_7
R_SM2F11_48_13, SM2F11, Bacteria

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comp(5359..5499)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_8
R_SM2F11_48_13, SM2F11, Bacteria

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5762..6178
DNA (417bp) protein (139aa)
DnaK suppressor protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0T4_9AQUI
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
TraR/DksA family transcriptional regulator
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6343..6618
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_10
R_SM2F11_48_13, SM2F11, Bacteria

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6741..7070
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_11
R_SM2F11_48_13, SM2F11, Bacteria

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7411..7611
DNA (201bp) protein (67aa)
50S ribosomal protein L32 n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B68BDE
LSU ribosomal protein L32P Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rpmF; 50S ribosomal protein L32
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_12
R_SM2F11_48_13, SM2F11, Bacteria

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7615..8061
DNA (447bp) protein (149aa)
putative transcription termination factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nusB; N utilization substance protein B; K03625 N utilization substance protein B id=2882 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
putative transcription termination factor
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8124..8495
DNA (372bp) protein (124aa)
Transcriptional activator protein Irlr n=1 Tax=uncultured bacterium RepID=K2EZH3_9BACT
two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
two-component response regulator
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8584..10272
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CR62_9BACT
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
general secretory pathway protein E
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10269..11654
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DE79_9BACT
type II secretory pathway, component PulF Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
type II secretion system protein F
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11679..12356
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037FAB73
excinuclease abc c subunit domain protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
excinuclease abc c subunit domain protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12307..13824
DNA (1518bp) protein (506aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
LVIVD repeat protein id=5102533 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13877..14146
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_19
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

14463..14597
DNA (135bp) protein (45aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_20
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

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14602..15093
DNA (492bp) protein (164aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
Type II secretion system pseudopilin OxpG id=1889147 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
N-terminal cleavage protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_21
R_SM2F11_46_11, SM2F11, Bacteria

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15159..15614
DNA (456bp) protein (152aa)
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=bacterium Ellin514 RepID=B9XLB6_9BACT id=87442 bin=ACD58 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
putative General secretion pathway protein GspG Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_22
CG_CPR10_01, CG_CPR10, Bacteria

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15704..16033
DNA (330bp) protein (110aa)
Marine sediment metagenome DNA, contig: S12H4_S05224 Tax=CG_CPR10_01
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_9493_23
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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15972..16598
DNA (627bp) protein (209aa)
hypothetical protein Tax=RBG_13_RIF_OD1_07_38_11_curated
Uncharacterized protein id=3486306 bin=GWA1_ZB2_49_26 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Displaying 23 items

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