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RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_1
R_SM2F11_48_13, SM2F11, Bacteria

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146..772
DNA (627bp) protein (209aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
signal peptidase I (EC:3.4.21.89)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000382DE9F
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


765..2033
DNA (1269bp) protein (423aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036B65C8
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2072..2371
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2477..3601
DNA (1125bp) protein (375aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_5
R_SM2F11_48_13, SM2F11, Bacteria

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comp(4043..4393)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
seg 42..53 id=2826 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4390..4512)
DNA (123bp) protein (41aa)
Copper-containing nitrite reductase (EC:1.7.2.1) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_7
R_SM2F11_48_13, SM2F11, Bacteria

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4537..4860
DNA (324bp) protein (108aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=uncultured bacterium RepID=K2DZL6_9BACT
RNA-directed DNA polymerase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RNA-directed DNA polymerase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5182..5631
DNA (450bp) protein (150aa)
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
GatB/yqey domain protein id=4889112 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
glutamyl-tRNA amidotransferase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5632..6879
DNA (1248bp) protein (416aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rrs:RoseRS_3793 cell division protein FtsA; K03590 cell division protein FtsA id=8903 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
cell division protein FtsA
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6951..8108
DNA (1158bp) protein (386aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Cell division protein FtsZ id=1889037 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cell division protein FtsZ
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8214..8615
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_12
R_SM2F11_48_13, SM2F11, Bacteria

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8615..9724
DNA (1110bp) protein (370aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9843..10082
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10094..10510
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AUC1_9BACT
putative toxin-antitoxin system toxin component, PIN family Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative toxin-antitoxin system toxin component, PIN family
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(10830..10943)
DNA (114bp) protein (38aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11382..11828
DNA (447bp) protein (149aa)
Transcriptional repressor NrdR n=1 Tax=uncultured bacterium RepID=K1Y6T3_9BACT
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nrdR; transcriptional regulator NrdR
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11948..14482
DNA (2535bp) protein (845aa)
ribonucleoside-diphosphate reductase class II Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Ribonucleoside-diphosphate reductase id=3486150 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ribonucleoside-diphosphate reductase class II
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14557..14748
DNA (192bp) protein (64aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=17068 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
excinuclease ABC C subunit domain-containing protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14717..15187
DNA (471bp) protein (157aa)
DNA mismatch repair protein MutT
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
NUDIX hydrolase id=5227251 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15184..15738
DNA (555bp) protein (185aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=32091 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_21
R_SM2F11_48_13, SM2F11, Bacteria

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15772..16179
DNA (408bp) protein (136aa)
transmembrane_regions 7..24 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 7..24 id=67279 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16247..16774
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein id=3794665 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17121..17969
DNA (849bp) protein (283aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCN2_9EURY
ribose-phosphate pyrophosphokinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ribose-phosphate pyrophosphokinase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_24
R_SM2F11_48_13, SM2F11, Bacteria

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17966..18601
DNA (636bp) protein (212aa)
phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5799 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoribosyltransferase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18585..19382
DNA (798bp) protein (266aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Orotidine 5'-phosphate decarboxylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ48_GRAMM
orotidine 5'-phosphate decarboxylase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_26
R_SM2F11_48_13, SM2F11, Bacteria

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19391..20404
DNA (1014bp) protein (338aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5A5_PEDSD
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_27
R_SM2F11_48_13, SM2F11, Bacteria

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20401..21624
DNA (1224bp) protein (408aa)
Allantoinase; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Allantoinase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ49_GRAMM
Allantoinase
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_28
R_SM2F11_49_9, SM2F11, Bacteria

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21621..22655
DNA (1035bp) protein (345aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5085564 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_29
R_SM2F11_48_13, SM2F11, Bacteria

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22652..25909
DNA (3258bp) protein (1086aa)
pmz:HMPREF0659_A5879 carB; carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=42158 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
carbamoyl-phosphate synthase, large subunit Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
carbamoyl-phosphate synthase, large subunit
RIFCSPLOWO2_01_FULL_CPR_48_57_rifcsplowo2_01_scaffold_5791_30
R_SM2F11_48_13, SM2F11, Bacteria

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25906..26817
DNA (912bp) protein (304aa)
aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
aspartate carbamoyltransferase
Aspartate carbamoyltransferase id=2193981 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 42 in total

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