ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

1..795
-----------------
DNA (795bp)
protein (265aa)
putative glycolate oxidase (EC:1.1.2.4) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
putative glycolate oxidase (EC:1.1.2.4)
FAD/FMN-containing dehydrogenase id=3285658 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

792..2066
-----------------
DNA (1275bp)
protein (425aa)
glcF; glycolate oxidase iron-sulfur subunit GlcF Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative uncharacterized protein id=1801947 bin=GWB2_Elusimicrobia_63_16 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
glcF; glycolate oxidase iron-sulfur subunit GlcF
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2063..3091
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CY66_PAESJ
protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3067..3801)
-----------------
DNA (735bp)
protein (245aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=5014863 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3842..4270
-----------------
DNA (429bp)
protein (143aa)
Marine sediment metagenome DNA, contig: S12H4_S18004 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4248..4643)
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein
Integral membrane protein CcmA involved in cell shape determination id=4409580 bin=GWA2_Elusi-like_A8_64_40 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4643..5821)
-----------------
DNA (1179bp)
protein (393aa)
metalloendopeptidase-like membrane protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Metalloendopeptidase-like membrane protein id=4938032 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Peptidase M23
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

5913..6356
-----------------
DNA (444bp)
protein (148aa)
ferric-uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Ferric uptake regulator, Fur family id=3841820 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ferric-uptake regulator
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6353..6547
-----------------
DNA (195bp)
protein (65aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

6550..7746
-----------------
DNA (1197bp)
protein (399aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Uncharacterized protein id=4493020 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

7781..8308
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Lipoprotein id=4493012 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

9012..9950
-----------------
DNA (939bp)
protein (313aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BNS0_9FIRM
Membrane-associated lipoprotein involved in thiamine biosynthesis Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
thiamine biosynthesis protein ApbE
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_33301_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

9943..10185
-----------------
DNA (243bp)
protein (81aa)
Similar to ferrous iron transport protein B (GTP binding) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4R2_9BACT
small GTP-binding protein domain-containing protein; K04759 ferrous iron transport protein B Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
small GTP-binding protein domain-containing protein
Displaying 13 items

View Taxonomy