ggKbase home page

RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

118..624
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
KilA-N, DNA-binding domain protein id=2592692 bin=GWC2_OP3-like_45_7 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(637..990)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein id=16783948 bin=RBG_16_Aminicenantes_63_16_plus species=Methanothermobacter thermautotrophicus genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_3
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1042..1281)
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_4
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1285..1500)
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
hypothetical protein id=3354605 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(1738..2013)
-----------------
DNA (276bp)
protein (92aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

2041..3015
-----------------
DNA (975bp)
protein (325aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) id=14430539 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_7
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3021..3329)
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Hypothetical cytosolic protein id=3375456 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_8
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(3421..4326)
-----------------
DNA (906bp)
protein (302aa)
nadA; quinolinate synthetase A; K03517 quinolinate synthase [EC:2.5.1.72] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
nadA; quinolinate synthase A (EC:2.5.1.72) id=14426445 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
quinolinate synthetase (EC:2.5.1.72)
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_9
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4323..5144)
-----------------
DNA (822bp)
protein (274aa)
PHP C-terminal domain protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3H8_DESAP
phosphotransferase domain-containing protein; K07053 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
phosphotransferase domain-containing protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(5141..6820)
-----------------
DNA (1680bp)
protein (560aa)
Thiamine biosynthesis protein ThiC n=1 Tax=mine drainage metagenome PF49_9ZZZZ">RepID=E6PF49_9ZZZZ
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
thiC; thiamine biosynthesis protein thic
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(6877..7269)
-----------------
DNA (393bp)
protein (131aa)
Two-component system response regulator (Fragment) n=2 Tax=human gut metagenome RepID=K1TLU4_9ZZZZ
response regulator receiver sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
response regulator receiver sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_12
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(7266..8804)
-----------------
DNA (1539bp)
protein (513aa)
putative fatty acid Co-A ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Putative fatty acid Co-A ligase id=2268866 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative fatty acid Co-A ligase
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(8877..9605)
-----------------
DNA (729bp)
protein (243aa)
Putative peptide transport fused subunits of ABC superfamily: ATP-binding components n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TT34_9BRAD
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_14
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(9598..10404)
-----------------
DNA (807bp)
protein (269aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFN2_CALOO
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
oligopeptide/dipeptide ABC transporter ATPase
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_15
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(10404..11231)
-----------------
DNA (828bp)
protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G374_GEOUR
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_16
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(11228..12199)
-----------------
DNA (972bp)
protein (324aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEV7_DESTA
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_17
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(12196..13389)
-----------------
DNA (1194bp)
protein (398aa)
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Oligopeptide-binding protein id=3249450 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
extracellular solute-binding protein
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(13824..14057)
-----------------
DNA (234bp)
protein (78aa)
putative transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
Transcriptional regulator, AsnC family id=2268808 bin=GWA2_Elusimicrobia_66_18 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_19
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(14080..14589)
-----------------
DNA (510bp)
protein (170aa)
Permease n=5 Tax=Dehalococcoides mccartyi RepID=D3SIA6_DEHSG
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
permease
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_20
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(14586..14927)
-----------------
DNA (342bp)
protein (114aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_21
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(14950..15156)
-----------------
DNA (207bp)
protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_22
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

15740..16162
-----------------
DNA (423bp)
protein (141aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_rifcsplowo2_01_scaffold_9639_23
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(16159..17361)
-----------------
DNA (1203bp)
protein (401aa)
Asparagine synthetase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9L8_DESTA
asparagine synthase, glutamine-hydrolyzing Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
asparagine synthase, glutamine-hydrolyzing
Displaying 23 items

View Taxonomy