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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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138..2291
DNA (2154bp) protein (718aa)
RNAse R (EC:3.1.-.-) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RNAse R (EC:3.1.-.-)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037722D8
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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2307..3059
DNA (753bp) protein (251aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EE7AD
TrmH family RNA methyltransferase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3288..3704
DNA (417bp) protein (139aa)
30S ribosomal protein S6 n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DFS4_9GAMM
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S6
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3740..3967
DNA (228bp) protein (76aa)
30S ribosomal protein S18 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RS18_THISH
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
30S ribosomal protein S18
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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4040..4948
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY17_NITHN
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_6
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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4994..5452
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RUR2_ALLVD
50S ribosomal protein L9 {ECO:0000313|EMBL:AKH19534.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
50S ribosomal protein L9
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_7
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5547..6959
DNA (1413bp) protein (471aa)
Replicative DNA helicase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1J8_NITHN
replicative DNA helicase Tax=RBG_16_Gammaproteobacteria_51_14_curated
replicative DNA helicase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_8
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6956..8041
DNA (1086bp) protein (362aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_16_Gammaproteobacteria_51_14_curated
Alanine racemase n=1 Tax=Beggiatoa alba B18LD RepID=I3CK43_9GAMM
alanine racemase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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8028..9392
DNA (1365bp) protein (455aa)
DNA repair protein radA n=1 Tax=Beggiatoa alba B18LD RepID=I3CG18_9GAMM
sms; DNA repair protein RadA Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
DNA repair protein RadA
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9449..9685)
DNA (237bp) protein (79aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10013..10171)
DNA (159bp) protein (53aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10242..10514)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEA5_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10562..10759)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YMT3_9DELT
hypothetical protein; K09803 hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_33417_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10759..11436)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7Q1_NITWC
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
Displaying 14 items

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