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RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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314..652
DNA (339bp) protein (113aa)
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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1005..2330
DNA (1326bp) protein (442aa)
trigger factor n=1 Tax=Pseudomonas pelagia RepID=UPI0003A7D5D7
tig; hypothetical protein; K03545 trigger factor Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
trigger factor
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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2362..3000
DNA (639bp) protein (213aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RT50_ALLVD
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3025..4305
DNA (1281bp) protein (427aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZE5_NITHN
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
ATP-dependent Clp protease ATP-binding subunit ClpX
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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4459..6891
DNA (2433bp) protein (811aa)
peptidase S16, ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
peptidase S16, ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Beggiatoa alba B18LD RepID=I3CI73_9GAMM
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7122..7394
DNA (273bp) protein (91aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Histone family protein DNA-binding protein id=2826656 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
histone family protein DNA-binding protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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7673..9598
DNA (1926bp) protein (642aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5T5_NITWC
PpiC-type peptidyl-prolyl cis-trans isomerase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9627..10838)
DNA (1212bp) protein (404aa)
Sodium:dicarboxylate symporter n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5T6_NITWC
sodium:dicarboxylate symporter Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
sodium:dicarboxylate symporter
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_9
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10898..11677)
DNA (780bp) protein (260aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
enoyl-ACP reductase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B31EC0
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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11809..13968
DNA (2160bp) protein (720aa)
Oligopeptide ABC transporter periplasmic component n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHC3_9GAMM
dipeptide ABC transporter substrate-binding protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
dipeptide ABC transporter substrate-binding protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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13965..14942
DNA (978bp) protein (326aa)
AppB oligopeptide ABC transporter n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VE1_NITEU
appB; appB; oligopeptide ABC transporter; K02033 peptide/nickel transport system permease protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
appB; appB; oligopeptide ABC transporter
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14953..16356
DNA (1404bp) protein (468aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RT58_ALLVD
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
binding-protein-dependent transport systems inner membrane component
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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16365..16763
DNA (399bp) protein (133aa)
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Thioesterase superfamily protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SH75_GALCS
thioesterase superfamily protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16903..18537
DNA (1635bp) protein (545aa)
ABC transporter, ATP-binding protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q609G6_METCA
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RifCSPlowO2_12_Gammaproteobacter
peptide ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_15
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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18612..19142
DNA (531bp) protein (177aa)
GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Burkholderia sp. KJ006 RepID=I2DXS4_9BURK
GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
RIFCSPLOWO2_01_FULL_Gammaproteobacteria_47_190_rifcsplowo2_01_scaffold_5268_16
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19222..19515)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000377FB63
GGDEF family protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
diguanylate cyclase (GGDEF) domain-containing protein
Displaying 16 items

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