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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..929)
DNA (927bp) protein (309aa)
Lipid-A-disaccharide synthase n=1 Tax=Beggiatoa sp. PS RepID=A7BT49_9GAMM
lipid-A-disaccharide synthase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lipid-A-disaccharide synthase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(933..1703)
DNA (771bp) protein (257aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F80_DECAR
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1704..2147)
DNA (444bp) protein (148aa)
3-hydroxyacyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Beggiatoa sp. PS RepID=A7BT51_9GAMM
(3R)-hydroxymyristoyl ACP dehydratase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2144..3181)
DNA (1038bp) protein (346aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVQ5_MARPU
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3188..3700)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037419C3
outer membrane chaperone Skp; K06142 outer membrane protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
outer membrane chaperone Skp
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3717..5966)
DNA (2250bp) protein (750aa)
Outer membrane protein assembly factor BamA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
surface antigen (D15) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
surface antigen (D15)
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..7410)
DNA (1362bp) protein (454aa)
membrane-associated Zn-dependent protease 1; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037473B5
membrane-associated Zn-dependent protease 1
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7407..8657)
DNA (1251bp) protein (417aa)
1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CFB3_9GAMM
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8661..9491)
DNA (831bp) protein (277aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Phosphatidate cytidylyltransferase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZPY2_PSEAC
phosphatidate cytidylyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9484..10260)
DNA (777bp) protein (259aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase id=1362212 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..10950)
DNA (567bp) protein (189aa)
ribosome recycling factor n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C215C
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
frr; Ribosome-recycling factor
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10953..11681)
DNA (729bp) protein (243aa)
pyrH; UMP kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrH; UMP kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HTK7_ACHXA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11831..12718)
DNA (888bp) protein (296aa)
endo-1,4-D-glucanase n=1 Tax=Leucothrix mucor RepID=UPI0003B3C9F0
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
tsf; elongation factor Ts
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12987..13919)
DNA (933bp) protein (311aa)
30S ribosomal protein S2 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035D65B8
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
30S ribosomal protein S2
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14413..15180
DNA (768bp) protein (256aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Methionine aminopeptidase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVW0_NITHN
methionine aminopeptidase, type I
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15306..18002
DNA (2697bp) protein (899aa)
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RBG_16_Gamma2_65_34_curated
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A7H8_ALKEH
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18248..18451)
DNA (204bp) protein (68aa)
ABC transporter n=1 Tax=Achromobacter piechaudii HLE RepID=J4Y6W6_9BURK
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18578..18928)
DNA (351bp) protein (117aa)
Transcriptional regulator-like protein n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0INZ0_LEPFC
transcriptional regulator-like protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
transcriptional regulator-like protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18925..19212)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZA26_LEPFM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19316..20026)
DNA (711bp) protein (237aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IPW5_BORPD
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
branched-chain amino acid ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20023..20823)
DNA (801bp) protein (267aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QG16_AZOSU
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
branched-chain amino acid ABC transporter ATPase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20807..21928)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036E1319
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
inner-membrane translocator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22043..22972)
DNA (930bp) protein (310aa)
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein id=12496168 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
branched-chain amino acid ABC-type transport system, permease component
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23089..24273)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D4D84
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
extracellular ligand-binding receptor
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24390..25763)
DNA (1374bp) protein (458aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1A7_NITHN
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25760..26218)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SM00_PSEME
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..27704)
DNA (1500bp) protein (500aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNC2_THISH
carbohydrate kinase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
carbohydrate kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27886..28953
DNA (1068bp) protein (356aa)
Epoxyqueuosine reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNC1_THISH
4Fe-4S cluster binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
4Fe-4S binding protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29003..29566)
DNA (564bp) protein (188aa)
Oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Oligoribonuclease n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH74_NITSI
Oligoribonuclease
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_3937_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29646..30887
DNA (1242bp) protein (414aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Ste24 endopeptidase (EC:3.4.24.84)
peptidase M48 n=1 Tax=Thiothrix disciformis RepID=UPI000370E2EE
Displaying items 1-30 of 42 in total

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