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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..538)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00036D1295
cytochrome C oxidase assembly protein, AA3 subunit-controlling protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
cytochrome C oxidase assembly protein, AA3 subunit-controlling protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

823..1164
DNA (342bp) protein (114aa)
AsnC family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI87_9PROT
putative AsnC family transcriptional regulator Tax=RBG_16_Betaproteobacteria_58_11_curated
AsnC family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1288..2490
DNA (1203bp) protein (401aa)
Elongator protein 3/MiaB/NifB n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML9_THIDA
Elongator protein 3/MiaB/NifB Tax=RBG_16_Gamma2_65_34_curated
Elongator protein 3/MiaB/NifB
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2532..4166
DNA (1635bp) protein (545aa)
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
nitrite reductase (EC:1.7.2.1)
Nitrite reductase (NO-forming) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMM0_THIDA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4599..4691
DNA (93bp) protein (31aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4727..5539)
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFQ9_9BACT
UbiE/COQ5 methyltransferase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
UbiE/COQ5 methyltransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5818..5913
DNA (96bp) protein (32aa)
Tryptophan synthase beta chain n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E8W7_9GAMM
Tryptophan synthase beta chain Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6011..6436
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5Q8_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..7709
DNA (1056bp) protein (352aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7728..8912
DNA (1185bp) protein (395aa)
Cardiolipin synthase, putative n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A7W2_PELCD
synthetase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cls-1; cardiolipin synthase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9102..9632
DNA (531bp) protein (177aa)
Glycine cleavage system regulatory protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y8A4_THIV6
glycine cleavage system regulatory protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glycine cleavage system regulatory protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10739)
DNA (945bp) protein (315aa)
phosphoribulokinase-like protein; K00855 phosphoribulokinase [EC:2.7.1.19] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
prkB; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase-like protein id=1374995 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10882..11163)
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11620..11775
DNA (156bp) protein (52aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12094..13248)
DNA (1155bp) protein (385aa)
diguanylate cyclase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B351E9
diguanylate cyclase; K13590 diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13361..14173)
DNA (813bp) protein (271aa)
Uncharacterized 28.2 kDa protein in hemB 3'region n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK8_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14178..14384)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AB109
ChaB protein; K06197 cation transport regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14518..15297)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4KR95_9GAMM
ABC transporter permease; K09694 lipooligosaccharide transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter permease
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_19
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15486..16676
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JW02_9GAMM
transposase, IS4 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
ISXoo8 transposase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16885..17796)
DNA (912bp) protein (304aa)
ABC transporter related protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPP8_SIDLE
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18119..18352
DNA (234bp) protein (78aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18596..18793
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18810..19616
DNA (807bp) protein (269aa)
Putative transcriptional regulator n=1 Tax=Halomonas sp. A3H3 RepID=T2L3M7_9GAMM
Putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19771..20337
DNA (567bp) protein (189aa)
hypothetical protein; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Peptide methionine sulfoxide reductase MsrB id=1894672 bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium NOR5-3 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20408..20713)
DNA (306bp) protein (102aa)
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1A3F6_9ZZZZ
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
XRE family transcriptional regulator
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20722..21000)
DNA (279bp) protein (93aa)
Plasmid maintenance system killer n=1 Tax=mine drainage metagenome RepID=T1D529_9ZZZZ
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
plasmid maintenance system killer protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21209..21817)
DNA (609bp) protein (203aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Glutathione S-transferase, C-terminal domain n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGD0_NITEC
glutathione S-transferase domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22053..22826)
DNA (774bp) protein (258aa)
pirin n=1 Tax=Burkholderia kururiensis RepID=UPI0003467BEA
pirin domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pirin domain-containing protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22931..23194)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_1266_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23405..24142
DNA (738bp) protein (246aa)
DSBA oxidoreductase n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QDG3_SHELP
DSBA oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DSBA oxidoreductase
Displaying items 1-30 of 50 in total

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