ggKbase home page

RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49..1131)
DNA (1083bp) protein (361aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Marinobacter sp. EVN1 RepID=U7NRJ7_9ALTE
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1132..2499)
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Nitrosococcus oceani RepID=Q3J785_NITOC
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2612..4039)
DNA (1428bp) protein (476aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QIS3_METS6
murE; UDP-N-acetylmuramyl-tripeptide synthetase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4036..5751)
DNA (1716bp) protein (572aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
cell division protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003800303
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5748..6026)
DNA (279bp) protein (93aa)
Cell division protein FtsL n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GMM2_THISH
cell division protein FtsL; K03586 cell division protein FtsL Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cell division protein FtsL
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6019..6927)
DNA (909bp) protein (303aa)
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
16S rRNA methyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036996BE
S-adenosyl-methyltransferase MraW
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6979..7446)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T5B2_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8288..8674)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein id=12496009 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8678..9466)
DNA (789bp) protein (263aa)
Dienelactone hydrolase family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJR6_9PROT
dienelactone hydrolase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dienelactone hydrolase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9657..10754
DNA (1098bp) protein (366aa)
aminoglycoside phosphotransferase n=1 Tax=Fischerella muscicola RepID=UPI0002F364E4
putative homoserine kinase type II (protein kinase fold) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative homoserine kinase type II (protein kinase fold)
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10910..11557
DNA (648bp) protein (216aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Adenylate kinase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZX9_DESAT
adenylate kinase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11682..11978
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg2 RepID=UPI0003824B06
osmY; osmotically-inducible protein OsmY Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
osmY; osmotically-inducible protein OsmY
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12295..12540
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003615D14
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12698..13852)
DNA (1155bp) protein (385aa)
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Cobyrinic acid ac-diamide synthase id=3858433 bin=GWF2_OP3_38_59 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Cobyrinic acid ac-diamide synthase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..14984)
DNA (639bp) protein (213aa)
Thioredoxin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIJ0_9PROT
putative protein-disulfide isomerase; K07396 putative protein-disulfide isomerase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative protein-disulfide isomerase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15252..15872)
DNA (621bp) protein (207aa)
MEKHLA domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UFD2_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16181..17032)
DNA (852bp) protein (284aa)
uroporphyrin-III C/tetrapyrrole methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IXE3_PSEPS
tetrapyrrole methylase family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_18
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16972..17799)
DNA (828bp) protein (276aa)
Tax=RBG_16_Gamma2_64_10_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18580..19005
DNA (426bp) protein (142aa)
LppC family lipoprotein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVN3_NITHN
LppC family lipoprotein; K07121 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative lipoprotein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_13616_20
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19020..19385
DNA (366bp) protein (122aa)
UPF0102 protein Noc_0355 n=2 Tax=Nitrosococcus oceani RepID=Y355_NITOC
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
hypothetical protein
Displaying 20 items

View Taxonomy