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RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..567)
DNA (567bp) protein (189aa)
Lipopolysaccharide heptosyltransferase III n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABC8_9PROT
lipopolysaccharide heptosyltransferase III Tax=RBG_16_Gamma2_65_34_curated
lipopolysaccharide heptosyltransferase III
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(598..1557)
DNA (960bp) protein (320aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RBG_16_Gamma2_65_34_curated
Lipopolysaccharide heptosyltransferase II n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X6Z0_METSD
lipopolysaccharide heptosyltransferase II
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1997..2761
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI54_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2786..2995)
DNA (210bp) protein (70aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative uncharacterized protein id=2673562 bin=GWC2_Nitrospirae-rel_56_14 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3131..4054)
DNA (924bp) protein (308aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Branched-chain amino acid aminotransferase, group I id=2673569 bin=GWC2_Nitrospirae-rel_56_14 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
branched-chain amino acid aminotransferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4177..7134)
DNA (2958bp) protein (986aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BVL4_9GAMM
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7407..8828
DNA (1422bp) protein (474aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase id=4417479 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9016..9105
DNA (90bp) protein (30aa)
glycosyl transferase group 2 family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9144..9848)
DNA (705bp) protein (235aa)
Family 2 glycosyl transferase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V4P2_9BACT
glycosyl transferase group 2 family protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9852..10703)
DNA (852bp) protein (284aa)
Putative conserved secreted protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VXL2_9CYAN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10700..12058)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0Q907_DESAH
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12031..13542)
DNA (1512bp) protein (504aa)
Glycosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QPB7_9DELT
group 2 glycosyl transferase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
group 2 glycosyl transferase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_13
GWF2_OD1_39_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13543..15033)
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00037BBBD5
Radical SAM domain protein Tax=GWF2_OD1_39_13
Radical SAM domain protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_14
RLO_PLX_64_10, Bacteria

Not on your lists

15307..16863
DNA (1557bp) protein (519aa)
Putative transporter component n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UIN1_SPIAZ
putative transporter component; K07112 Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative transporter component
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_15
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16879..17238
DNA (360bp) protein (120aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_16
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17345..18241
DNA (897bp) protein (299aa)
Rhodanese-related sulfurtransferase-like protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
Rhodanese domain protein id=1339543 bin=GWE1_T_denit_62_9 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese domain protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18259..18807
DNA (549bp) protein (183aa)
Thiol-disulfide oxidoreductase resA n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC7B
resA; thiol-disulfide oxidoreductase resA Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
resA2; thiol-disulfide oxidoreductase ResA
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18812..21667
DNA (2856bp) protein (952aa)
dimethylsulfide dehydrogenase subunit alpha (Dimethylsulfide dehydrogenase molybdenum subunit) (DMS DH alphasubunit) (DMS DH molybdenum subunit) (EC:1.8.-.-)
molydopterin dinucleotide-binding region Tax=RBG_16_Betaproteobacteria_66_20_curated
DMSO reductase family type II enzyme, molybdopterin subunit id=1339542 bin=GWE1_T_denit_62_9 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21660..22853
DNA (1194bp) protein (398aa)
respiratory nitrate reductase 1 beta chain (Nitratereductase subunit A beta) (Quinol-nitrate oxidoreductase subunitbeta) (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4] Tax=RBG_1
respiratory nitrate reductase 1 beta chain (Nitratereductase subunit A beta) (Quinol-nitrate oxidoreductase subunitbeta) (EC:1.7.99.4)
Respiratory nitrate reductase 1 beta chain (Nitratereductase A subunit beta) (Quinol-nitrate oxidoreductase subunitbeta) n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QP51_PERMH
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22850..23917
DNA (1068bp) protein (356aa)
ethylbenzene dehydrogenase family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
DMSO reductase family type II enzyme, heme b subunit id=12493713 bin=THIO_HI species=Thauera selenatis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c-552/dmso reductase-like, heme-binding domain
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_21
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23984..24214
DNA (231bp) protein (77aa)
SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YAU2_THIV6
putative redox protein, regulator of disulfide bond formation
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_22
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24221..24451
DNA (231bp) protein (77aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YY35_9GAMM
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EIC23361.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodo
putative redox protein, regulator of disulfide bond formation
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24477..24914
DNA (438bp) protein (146aa)
Rubrerythrin n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SLE2_THEAH
rubrerythrin Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
rubrerythrin
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24914..25723
DNA (810bp) protein (270aa)
ATP-binding protein involved in chromosome partitioning; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ATPase of the MinD/MRP superfamily (mrp-like)(ATP/GTP-binding protein) id=14425300 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
ParA/MinD-like ATPase
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_25
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25734..26729
DNA (996bp) protein (332aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
radical SAM protein n=1 Tax=Methylococcus capsulatus RepID=UPI000304C9F3
moaA; molybdenum cofactor biosynthesis protein A
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_26
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26814..27044
DNA (231bp) protein (77aa)
SirA family protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RPC0_ALLVD
Redox protein {ECO:0000313|EMBL:KHF24551.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_27
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27026..27403)
DNA (378bp) protein (126aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_28
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27582..28142
DNA (561bp) protein (187aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P)(+) transhydrogenase (AB-specific) id=3855623 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_29
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28147..28434
DNA (288bp) protein (96aa)
NAD/NADP transhydrogenase; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Lamprocystis purpurea RepID=UPI00037F83DC
RIFCSPLOWO2_01_FULL_Gammaprotoebacteria_60_18_rifcsplowo2_01_scaffold_4600_30
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28438..29832
DNA (1395bp) protein (465aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta n=1 Tax=Thiocapsa marina 5811 RepID=F9UGL8_9GAMM
NAD/NADP transhydrogenase subunit beta Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Displaying items 1-30 of 51 in total

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