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RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_1

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comp(2..241)
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein id=4532011 bin=GWA2_OP3_52_12 species=Candidatus Nitrosoarchaeum koreensis genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_2

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292..1050
-----------------
DNA (759bp)
protein (253aa)
hisF; Imidazole glycerol phosphate synthase subunit HisF (IGP synthase cyclase subunit) (IGP synthase subunit HisF) (ImGP synthase subunit HisF) (IGPS subunit hisF) (EC:4.1.3.-)
imidazole glycerol phosphate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E349
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_3

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1054..1659
-----------------
DNA (606bp)
protein (202aa)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXX1_9CLOT
hisH; imidazole glycerol phosphate synthase subunit HisH
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_4
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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1656..2867
-----------------
DNA (1212bp)
protein (404aa)
N-acetyl sugar amidotransferase n=1 Tax=Pseudomonas sp. GM60 RepID=J3B8V2_9PSED
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_5

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2930..3790
-----------------
DNA (861bp)
protein (287aa)
Radical SAM superfamily enzyme n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q7N1_9DELT
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_6
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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3842..4714
-----------------
DNA (873bp)
protein (291aa)
Glycosyl transferase family 2 id=3470869 bin=GWA2_Elusimicrobia_56_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
family 2 glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_7

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4707..5444
-----------------
DNA (738bp)
protein (246aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
N-acylneuraminate cytidylyltransferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UW59_CLOBO
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_8
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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5446..6339
-----------------
DNA (894bp)
protein (298aa)
putative Oxidoreductase
Oxidoreductase id=4824356 bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_9
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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6329..7330
-----------------
DNA (1002bp)
protein (334aa)
Oxidoreductase domain protein id=3556157 bin=GWF2_Lentisphaerae_38_69 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
oxidoreductase domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_10

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7368..9104
-----------------
DNA (1737bp)
protein (579aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00037EAF72
carbamoyl transferase, NodU family
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_11

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9101..9901
-----------------
DNA (801bp)
protein (267aa)
UDP-glucose 4-epimerase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YQA2_TREPZ
UDP-glucose 4-epimerase
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_12

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9964..12894
-----------------
DNA (2931bp)
protein (977aa)
Uncharacterized protein id=4219073 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
glycoside hydrolase family protein
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_13

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12932..14077
-----------------
DNA (1146bp)
protein (382aa)
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D704_METSW
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_14

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14079..15158
-----------------
DNA (1080bp)
protein (360aa)
N-acetylneuraminate synthase (EC:2.5.1.57)
NeuB family protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R838_9THEO
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_15
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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15142..16179
-----------------
DNA (1038bp)
protein (346aa)
Uncharacterized membrane protein MJ1061 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y1061_METJA
capsular polysaccharide biosynthesis protein D
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_16

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16163..17956
-----------------
DNA (1794bp)
protein (598aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter related n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10Y45_TRIEI
RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_5831_17
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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17959..19251
-----------------
DNA (1293bp)
protein (431aa)
Capsule polysaccharide export protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LHI7_9BURK
hypothetical protein
Displaying 17 items

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