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RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_1476_20

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: 12904..14820

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair coupling factor Tax=GWA1_OD1_43_15 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 609.0
  • Bit_score: 1192
  • Evalue 0.0
Transcription-repair coupling factor id=2824521 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 658.0
  • Bit_score: 623
  • Evalue 2.60e-175
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 625.0
  • Bit_score: 487
  • Evalue 6.20e-135

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Taxonomy

GWA1_OD1_43_15 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1917
TTGGAAAAGGGGGCGGGTTGGTTTTCCCAGAATTTTTCGGAAATTGAAAAAAATCGAGTAAATAATGCTTTTTGGCAGAGGAACACTTTGATTCTTGAAACCGGACAAAGAATTAAACTCTCTGAATTTTTAAGAAAAATTGTGGAGTTGGGGTATTCAAAAGTTTGGGAAGTGCATCACAGGGGAGAATTTTCTCAGCGTGGAAATGTTGTTTACATCGTTCCCATAAATGGTGGTCAAATTTACCCCCACACCAATGACATTGGTGTGGGGGTTTACTCAATTGAGTTTGAGGGAAATTATATTGAAAGTATAATAGGAAAAAGTTTTACTTCTTCACTAAATGTGAAGCCAACCATTCAGAAGCAAAACCTTTTCCTGCCGGGCGATTACGTTGTTCATATTGATCATGGCATCGGGATTTTTCGTGGAGAGAAGGAAGAGGATTACATAATTGAATACGCAACTCCCAAAAACCGTCCCAATTCTCCGGATTTGCTTTTTATTCCCAAAAAAGAAATTAAGAGAATTTCTCCTTATTTGGGTTTTAAAAAACCGGAAATTCATCGCTTGGGAACCCTCGCTTGGAGTTTGACAAAGAAAAAAGCCAAAGAAGACATATTAGCTTACGCCAAAGAACTTTTGGAAATTTTTGCCAAAAGAAAAATCGCTTCCCGTCCGCCTTATGCGGCGCATCATGAATTGGAGGAAGAGCTGATTTCCAATTTTCAATATGAATACACGCCCGACCAGAAAAAAGCTCTGGAAGAGATTTTCGCGGATATGTCAAAAAATGTGCCGATGGATAGAGTTTTGATGGGCGATGTCGGTTTTGGAAAAACAGAGCTCGCGGTTGTGGCGGCGTTCCGCGCCGTGCTTACGGGAAAGCAAACAGCGATTATGGCGCCCACCACGATTTTAGCCGACCAGCATTTTGAAATTTTTAAAAAACGCCTTGAACTTTTTGGGGTAAATGTGGCTAGGCTTACCCGCCTGGAAAGCTCGGAAAAAATAAAAGAAATTTTAAAAAAGATTGAAGACGGCCGGACGGATATTGTAATCGGGACGCATAAAATTTTAGGAAAAAACATAAAGTTTAAGAATTTAGGCCTATTAATTATTGACGAAGAACAGAAATTTGGCGTTGCCCAGAAGGAAAAATTCAAAAAAGAGAATCCTTCGCTTGATATTCTGACTCTTTTCGCGACGCCGATTCCTAGAACCTTGCAATTAGCGCTTTCCGGAATCCGCGCGATTTCCGAAATCTCAACTCCTCCGGAAGGCAGAATGAAAATTGAGACTTTCGTGCTCCCAAAAAATAAAAGATTAATCAAAGAAGCGATTTTATATGAATTAAAAAGAAAAGGCCAAATTTATTTTCTAGCCAATAGGATCCATAAAATCCCCGCGCTTTTGGAGGAAATTAAAATTTTAAAAACCGGCGCCAAAATAGGCGTGCTTCACGGAAGAATGCCGGAAGCTAAAATTATAAAAACCATGCATGATTTTCGCGAAGGGAAATCAGACCTTTTGGTTTCCACCACGATTATTGAAAATGGGATGGATCTTTCCAACGTAAACACTTTGATTGTGGAAGATGCCACGCGCTTGGGGCTTTCGCAGGCGCACCAATTGCGTGGAAGAATCGGGCGTGGAGATAAAGAGGCGTTTGCTTATTTTTTGTACCTTACTCAGCACCTCAAAGAAAAAGCCGTCTCTAGATTAGGGGCGCTAGAGAGGTATTCATGGCTCGGCGCAGGTTTGGAAATTGCTAAAAGAGATTTGGAAATCCGTGGCGCGGGAAATATTTTGGGCCGCGCCCAGTCGGGCATCGCCTTCCGCATCGGATTAAATCTTTATTTTGAACTTTTGGAGGAAGCAATTTCGGAAACCCGTGGATTTGACAAAAATAGCTAG
PROTEIN sequence
Length: 639
LEKGAGWFSQNFSEIEKNRVNNAFWQRNTLILETGQRIKLSEFLRKIVELGYSKVWEVHHRGEFSQRGNVVYIVPINGGQIYPHTNDIGVGVYSIEFEGNYIESIIGKSFTSSLNVKPTIQKQNLFLPGDYVVHIDHGIGIFRGEKEEDYIIEYATPKNRPNSPDLLFIPKKEIKRISPYLGFKKPEIHRLGTLAWSLTKKKAKEDILAYAKELLEIFAKRKIASRPPYAAHHELEEELISNFQYEYTPDQKKALEEIFADMSKNVPMDRVLMGDVGFGKTELAVVAAFRAVLTGKQTAIMAPTTILADQHFEIFKKRLELFGVNVARLTRLESSEKIKEILKKIEDGRTDIVIGTHKILGKNIKFKNLGLLIIDEEQKFGVAQKEKFKKENPSLDILTLFATPIPRTLQLALSGIRAISEISTPPEGRMKIETFVLPKNKRLIKEAILYELKRKGQIYFLANRIHKIPALLEEIKILKTGAKIGVLHGRMPEAKIIKTMHDFREGKSDLLVSTTIIENGMDLSNVNTLIVEDATRLGLSQAHQLRGRIGRGDKEAFAYFLYLTQHLKEKAVSRLGALERYSWLGAGLEIAKRDLEIRGAGNILGRAQSGIAFRIGLNLYFELLEEAISETRGFDKNS*