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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(395..1399)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGB0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1790..2419
-----------------
DNA (630bp)
protein (210aa)
NUDIX hydrolase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484BE0
NUDIX family hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
NUDIX family hydrolase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_3
GWB1_OD1_44_7, Parcubacteria, Bacteria

Not on your lists

2819..3016
-----------------
DNA (198bp)
protein (66aa)
PemK family protein Tax=GWB1_OD1_44_7
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_4
unknown

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3617..3826
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4001..4291
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=2439383 bin=GWC2_TM7_44_17 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4430..4873
-----------------
DNA (444bp)
protein (148aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4876..5370
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E987E
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5386..5931
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein
id=3309827 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=3309827 bin=GWA1_ZB2_49_26 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5928..6362
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transmembrane_regions id=5226066 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6417..7289
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=3309825 bin=GWA1_ZB2_49_26 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7319..9391
-----------------
DNA (2073bp)
protein (691aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
cation transporting ATPase, E1-E2 family; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=15191661 bin=GWC1_OP11_49_16_COMPLETE species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
copper-translocating P-type ATPase (EC:3.6.3.4)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9808..10185
-----------------
DNA (378bp)
protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


10425..11684
-----------------
DNA (1260bp)
protein (420aa)
gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (EC:3.4.24.57) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=5803482 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp (EC:3.4.24.57)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11742..12938)
-----------------
DNA (1197bp)
protein (399aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Peptidoglycan binding-like id=5095180 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
adhesin autotransporter
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13173..14198)
-----------------
DNA (1026bp)
protein (342aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


14551..16719
-----------------
DNA (2169bp)
protein (723aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Valyl-tRNA synthetase id=3486328 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
valyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16726..17433
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein id=5803648 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17423..17899
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
heat shock protein Hsp20; K13993 HSP20 family protein id=5803649 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
heat-shock protein Hsp20
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17903..18160
-----------------
DNA (258bp)
protein (86aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=4968538 bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(18770..19162)
-----------------
DNA (393bp)
protein (131aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transmembrane_regions id=5803575 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19586..20017)
-----------------
DNA (432bp)
protein (144aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9130_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20007..20138)
-----------------
DNA (132bp)
protein (44aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying 22 items

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