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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2..1081
-----------------
DNA (1080bp)
protein (360aa)
id=5084317 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1683..2510)
-----------------
DNA (828bp)
protein (276aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2894..4162)
-----------------
DNA (1269bp)
protein (423aa)
Putative uncharacterized protein id=3423034 bin=GWA1_ZB2_49_26 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4500..4610)
-----------------
DNA (111bp)
protein (37aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4641..5264
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037526DA
protein-L-isoaspartate(D-aspartate) O-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5206..6195
-----------------
DNA (990bp)
protein (330aa)
Aminodeoxychorismate lyase n=1 Tax=uncultured bacterium RepID=K1Y7R7_9BACT
aminodeoxychorismate lyase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

6249..7358
-----------------
DNA (1110bp)
protein (370aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036F8AFA
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


7389..9179
-----------------
DNA (1791bp)
protein (597aa)
BSCG--tRNA--synthetase--alanyl
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B0FAE
Alanine-tRNA ligase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9185..10369
-----------------
DNA (1185bp)
protein (395aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10385..11710
-----------------
DNA (1326bp)
protein (442aa)
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

11786..12007
-----------------
DNA (222bp)
protein (74aa)
Translation initiation factor IF-1 id=4250696 bin=GWF2_OP9_related_35_9 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
translation initiation factor IF-1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12042..12212
-----------------
DNA (171bp)
protein (57aa)
50S ribosomal protein L36 n=1 Tax=Helicobacter macacae MIT 99-5501 RepID=V8C8N2_9HELI
rpmJ; 50S ribosomal protein L36
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


12355..12741
-----------------
DNA (387bp)
protein (129aa)
BSCG--ribosomal--protein--S13
30S ribosomal protein S13 id=4241945 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rpsM; 30S ribosomal protein S13
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12686..12973
-----------------
DNA (288bp)
protein (96aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


12982..13425
-----------------
DNA (444bp)
protein (148aa)
BSCG--ribosomal--protein--S11
Ribosomal protein S11 id=5227100 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S11
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


13457..14086
-----------------
DNA (630bp)
protein (210aa)
BSCG--ribosomal--protein--S4
30S ribosomal protein S4 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737841
30S ribosomal protein S4
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14083..15072
-----------------
DNA (990bp)
protein (330aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4241939 bin=GWC2_OD1_43_27 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


15081..15431
-----------------
DNA (351bp)
protein (117aa)
BSCG--ribosomal--protein--L17
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037DA5EB
rplQ; 50S ribosomal protein L17
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


15452..15826
-----------------
DNA (375bp)
protein (125aa)
BSCG--ribosomal--protein--L13
50S ribosomal protein L13 n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B64BCA
50S ribosomal protein L13
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


15810..16262
-----------------
DNA (453bp)
protein (151aa)
BSCG--ribosomal--protein--S9
ASCG--Ribosomal--protein--S9
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5803411 bin=OD1_GWC2_34_28 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsI; 30S ribosomal protein S9
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16497..17165
-----------------
DNA (669bp)
protein (223aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=2809 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

17162..17632
-----------------
DNA (471bp)
protein (157aa)
GrpE protein; K03687 molecular chaperone GrpE id=84293 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
grpE; DnaJ adenine nucleotide exchange factor GrpE
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

17658..19574
-----------------
DNA (1917bp)
protein (639aa)
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

19558..20508
-----------------
DNA (951bp)
protein (317aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

20596..21669
-----------------
DNA (1074bp)
protein (358aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DnaJ; molecular chaperone DnaJ
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21676..22128
-----------------
DNA (453bp)
protein (151aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(22647..23171)
-----------------
DNA (525bp)
protein (175aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

23349..23600
-----------------
DNA (252bp)
protein (84aa)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

23640..24164
-----------------
DNA (525bp)
protein (175aa)
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured bacterium RepID=K1Y2D8_9BACT
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

24184..25203
-----------------
DNA (1020bp)
protein (340aa)
hypothetical protein id=5801239 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Displaying items 1-30 of 119 in total

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