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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395

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Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3..2684
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B686F3
beta-lactamase
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3059..4063
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00035D98AA
ATPase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
AAA ATPase containing von Willebrand factor type A (vWA) domain
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4128..4598
DNA (471bp) protein (157aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
peroxiredoxin (EC:1.11.1.15)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D5H4_9BACT
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

6132..6563
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(6676..7494)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036FB125
znuB; Zinc transport system permease protein; K09816 zinc transport system permease protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
znuB; Zinc transport system permease protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7487..8206)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ABC transporter related-protein id=3743961 bin=GWF2_Planctomycetes_50_10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8209..9189)
DNA (981bp) protein (327aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2A831_9BACT
putative periplasmic solute binding protein for ABC transport system; K02077 zinc/manganese transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative periplasmic solute binding protein for ABC transport system
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(9436..9702)
DNA (267bp) protein (89aa)
DNA repair protein radC homolog n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YB58_9DELT
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA repair protein RadC
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(9704..10060)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037AC1EF
toxin-antitoxin system; K07341 death on curing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
toxin-antitoxin system
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10117..10371)
DNA (255bp) protein (85aa)
id=3647709 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=3647709 bin=GWC2_OP3_44_8 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(11128..12363)
DNA (1236bp) protein (412aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RNA polymerase sigma factor id=2669954 bin=GWA1_ZB2_49_26 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RpoD subfamily RNA polymerase sigma-70 subunit
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12426..14339)
DNA (1914bp) protein (638aa)
DNA primase, catalytic core Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA primase id=2823715 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
DNA primase, catalytic core
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14556..15686
DNA (1131bp) protein (377aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

15729..16883
DNA (1155bp) protein (385aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16904..17440
DNA (537bp) protein (179aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803073 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

17460..17924
DNA (465bp) protein (155aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803072 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(17951..18649)
DNA (699bp) protein (233aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003706932
6-phosphogluconolactonase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18922..19176
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(19618..20298)
DNA (681bp) protein (227aa)
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
NADP oxidoreductase, coenzyme F420-dependent; K06988 id=35201 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
NADP oxidoreductase, coenzyme F420-dependent
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(20312..20704)
DNA (393bp) protein (131aa)
mannose-6-phosphate isomerase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cpsB; mannose-1-phosphate guanyltransferase id=43105 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
mannose-6-phosphate isomerase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(20901..21485)
DNA (585bp) protein (195aa)
seg 8..18 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg 8..18 id=133321 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(21669..22952)
DNA (1284bp) protein (428aa)
hypothetical protein CNitlB_11264 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein CNitlB_11264 id=3594569 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(23081..23878)
DNA (798bp) protein (266aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg 91..107 id=9078 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(24392..25123)
DNA (732bp) protein (244aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(25144..26043)
DNA (900bp) protein (300aa)
HtpX2; heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Protease HtpX homolog n=1 Tax=uncultured bacterium RepID=K1XF00_9BACT
Zn-dependent protease with chaperone function
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(26166..26720)
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGY6_9FIRM id=133428 bin=ACD81 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
LemA family protein; K03744 LemA protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
LemA family protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(26861..28516)
DNA (1656bp) protein (552aa)
chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
60 kDa chaperonin id=2823893 bin=GWC1_OD1_38_17 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
chaperonin GroEL
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(28581..28880)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037291C1
chaperonin Cpn10; K04078 chaperonin GroES Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
chaperonin Cpn10
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(29094..31949)
DNA (2856bp) protein (952aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
UvrABC system protein A id=2670085 bin=GWA1_ZB2_49_26 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
excinuclease ABC subunit A
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

32098..33426
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036B9CB9
excinuclease ABC C subunit domain protein; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Excinuclease ABC subunit C
Displaying items 1-30 of 67 in total

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