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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_25

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_44_230

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 ASCG 10 / 38
Location: 29559..30110

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 358
  • Evalue 4.70e-96
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 183.0
  • Bit_score: 162
  • Evalue 3.60e-37
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 174.0
  • Bit_score: 101
  • Evalue 2.10e-19

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Taxonomy

R_RIF_OD1_12_44_230 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCTCAACTACCAAACCGATGAAGAACTGCTTCGTTCATCTATGGGAACACCCGCCGTGTTTGGAGAACTAGTTGACCGTTATCAGGAAAAGCTTTTTCGGCTCGCATTTAATATAGTAAGGCAAAAGGAAGAAGCTGAGGACATTGTACAGGAGGCTTTTACGAAGATATATTTGAACGCTAACAAGTTTAAGAAGCAGGAAGGGGCAAGTTTTAAAAGTTGGGCATATAGAATAGCGTTTAATAGTTCCATTTCTCATTACCGCAAACTCAAAAGGACACGAGAGCGTGAAATTGTTTTAGATCCGGAGATATATAAGAATCTTCCCGGTGAATCAAGGATTGATGTGGAAACCGATGCCCGAATTACCGCGTTAAAGCTATTAGATAGGCTACCTAATGAATTGCGCAGGGTCGTGAAAATGTATTATTTTGAGGACAAATCTTACAGCGCCATCGCTTCAGAAGAAGATATACCTCTTTCTACGTTAAAGATGCGTTTGTTTAGGGCAAAAAAATTACTAAAGAATATGGTATATGAAACTTTATGA
PROTEIN sequence
Length: 184
MLNYQTDEELLRSSMGTPAVFGELVDRYQEKLFRLAFNIVRQKEEAEDIVQEAFTKIYLNANKFKKQEGASFKSWAYRIAFNSSISHYRKLKRTREREIVLDPEIYKNLPGESRIDVETDARITALKLLDRLPNELRRVVKMYYFEDKSYSAIASEEDIPLSTLKMRLFRAKKLLKNMVYETL*