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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546

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Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

259..696
DNA (438bp) protein (146aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

686..1339
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DG28_9BACT
HD superfamily hydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
HD superfamily hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

1506..2159
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DG28_9BACT
HD superfamily hydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
HD superfamily hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2585..3286
DNA (702bp) protein (234aa)
seg 187..199 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg 187..199 id=136783 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3416..3838
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3968..4651
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037AB343
small-conductance mechanosensitive ion channel Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
small-conductance mechanosensitive ion channel
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4943..5482)
DNA (540bp) protein (180aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5498..5719
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5773..6291)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=Q3BKI1_9PROT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

8089..8379
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9879..10631
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=2482479 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10628..11761
DNA (1134bp) protein (378aa)
rodA; rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
mrdB; rod shape-determining protein RodA; K05837 rod shape determining protein RodA id=5802978 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rodA; rod shape-determining protein RodA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12065..13096
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000376A7FA
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

13176..14510
DNA (1335bp) protein (445aa)
id=1947790 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=1947790 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

14552..15100
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTB2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

15154..16596
DNA (1443bp) protein (481aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=5226944 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16826..18652
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CPT1_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18817..19128
DNA (312bp) protein (104aa)
Uncharacterized protein involved in tolerance to divalent cations n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BK73_9EURY
Uncharacterized protein involved in tolerance to divalent cations Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein involved in tolerance to divalent cations
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

19172..21058
DNA (1887bp) protein (629aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=5226946 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(21197..21766)
DNA (570bp) protein (190aa)
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Elongation factor P id=4242105 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
efp; elongation factor P
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21910..23403
DNA (1494bp) protein (498aa)
aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D9163
aspartyl/glutamyl-tRNA amidotransferase subunit B
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(23515..24408)
DNA (894bp) protein (298aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.8); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
tRNA dimethylallyltransferase id=3736869 bin=GWC2_OD1_43_27 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
tRNA delta(2)-isopentenylpyrophosphate transferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(24472..26226)
DNA (1755bp) protein (585aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=5802518 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
thrS; threonyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(26227..29400)
DNA (3174bp) protein (1058aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000370808A
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

29559..30110
DNA (552bp) protein (184aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNA polymerase, sigma-24 subunit, ecf subfamily
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

30149..30463
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

30559..31161
DNA (603bp) protein (201aa)
ribonuclease HII (EC:3.1.26.4) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Candidatus Kinetoplastibacterium oncopeltii TCC290E RepID=M1LYW7_9PROT
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(31172..32347)
DNA (1176bp) protein (392aa)
General secretion pathway protein E n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYH2_9AQUI
gspE; general secretion pathway protein E; K02454 general secretion pathway protein E Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
general secretion pathway protein E
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

32432..32719
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F
LSU ribosomal protein L32P Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
LSU ribosomal protein L32P
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_546_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

32880..33785
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYA3_9BACT
putative transcription termination factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative transcription termination factor
Displaying items 1-30 of 80 in total

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