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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_1
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(2..685)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-K03 RepID=UPI00037B3BD5
thrombospondin N-terminal-like domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_2
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(736..3126)
-----------------
DNA (2391bp)
protein (797aa)
Elongation factor 4 id=3619209 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Translation elongation factor LepA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_3

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3251..3775
-----------------
DNA (525bp)
protein (175aa)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_4

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comp(3791..5488)
-----------------
DNA (1698bp)
protein (566aa)
Integral membrane protein MviN id=4968543 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative peptidoglycan lipid II flippase MurJ
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_5

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comp(5494..7812)
-----------------
DNA (2319bp)
protein (773aa)
Putative uncharacterized protein id=4968544 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_6

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8390..9964
-----------------
DNA (1575bp)
protein (525aa)
MutT/NUDIX family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW48_9BACT
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_7
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(10021..11835)
-----------------
DNA (1815bp)
protein (605aa)
oligoendopeptidase id=14424491 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
oligoendopeptidase F
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_8

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comp(11987..12376)
-----------------
DNA (390bp)
protein (130aa)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_9
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

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comp(12450..12893)
-----------------
DNA (444bp)
protein (148aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] id=130638 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
DNA mismatch endonuclease Vsr
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_10
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(12859..13962)
-----------------
DNA (1104bp)
protein (368aa)
Cytosine-specific methyltransferase n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YZ87_LYNSP
Type II restriction enzyme HaeII
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_11

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comp(13904..14950)
-----------------
DNA (1047bp)
protein (349aa)
Modification methylase HpaII n=1 Tax=Lyngbya aestuarii BL J RepID=U7QBS3_9CYAN
DNA-cytosine methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_6242_12
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(15188..18031)
-----------------
DNA (2844bp)
protein (948aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) id=1842214 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Displaying 12 items

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