ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_1

Not on your lists

comp(49..1191)
-----------------
DNA (1143bp)
protein (381aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=uncultured bacterium RepID=K2FPH9_9BACT
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_2

Not on your lists

comp(1188..1859)
-----------------
DNA (672bp)
protein (224aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=15189875 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
endonuclease III (EC:4.2.99.18)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_3

Not on your lists

comp(1860..2102)
-----------------
DNA (243bp)
protein (81aa)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_4

Not on your lists

comp(2107..2709)
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F191A
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2846..3877)
-----------------
DNA (1032bp)
protein (344aa)
NMT1/THI5 like domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M261_GEODF
NMT1/THI5 like domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_6

Not on your lists


comp(3955..5325)
-----------------
DNA (1371bp)
protein (457aa)
BSCG--tRNA--synthetase--Histidyl
histidyl-tRNA synthetase (EC:6.1.1.21)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036B65C8
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_7

Not on your lists

comp(5337..5882)
-----------------
DNA (546bp)
protein (182aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_8

Not on your lists

5885..6472
-----------------
DNA (588bp)
protein (196aa)
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=5803533 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_9

Not on your lists

6969..7235
-----------------
DNA (267bp)
protein (89aa)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_28565_10

Not on your lists

7326..7721
-----------------
DNA (396bp)
protein (132aa)
Displaying 10 items

View Taxonomy