ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_1
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

220..774
DNA (555bp) protein (185aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_2
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(796..1950)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_10b
Putative uncharacterized protein id=3475354 bin=GWA2_OP3_52_12 species=Roseburia inulinivorans genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_3
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1925..2143)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000378D02B
hypothetical protein Tax=GWA2_Deltaproteobacteria_45_12_curated
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_4
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(2180..3019)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) RepID=C7BGQ5_PHOAA
Putative uncharacterized protein spnH (Similarities with putative methyltransferase) (Probable o-methyltransferase) Tax=GWA2_OD1_47_10b
spnH; probable o-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_5
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

3075..4400
DNA (1326bp) protein (442aa)
Membrane protein, putative Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

4454..5236
DNA (783bp) protein (261aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_7
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

5332..6036
DNA (705bp) protein (235aa)
Glycosyl transferase family 2 Tax=GWA2_OD1_47_10b
Glycosyl transferase family 2 id=3521370 bin=GWA2_CPR4_42_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
family 2 glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_8
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

6038..6733
DNA (696bp) protein (232aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R2R2_MYCS2
Oxidoreductase, short chain dehydrogenase/reductase family protein Tax=GWA2_OD1_47_10b
short-chain dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

6764..7990
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036226D1
NDP-hexose 3,4-dehydratase {ECO:0000313|EMBL:KKU51814.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
NDP-hexose 3,4-dehydratase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

7965..9002
DNA (1038bp) protein (346aa)
dTDP-glucose 4,6-dehydratase Tax=GWA2_OD1_47_10b
dTDP-glucose 4,6-dehydratase id=4901196 bin=GWC2_OD1_43_27 species=Geobacillus stearothermophilus genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
dTDP-glucose 4,6-dehydratase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(8999..9703)
DNA (705bp) protein (235aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(9700..10395)
DNA (696bp) protein (232aa)
Polysaccharide deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSP5_PSEUX
Polysaccharide deacetylase Tax=GWA2_OD1_47_10b
polysaccharide deacetylase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(10406..11086)
DNA (681bp) protein (227aa)
Methyltransferase type 12 Tax=GWA2_OD1_47_10b
methyltransferase type 12 id=133650 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
type 12 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(11091..12500)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000378DAB2
Methyltransferase type 12 Tax=GWA2_OD1_47_10b
type 12 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_15
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(12505..13035)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036802EC
Bifunctional protein HldE Tax=GWA2_OD1_47_10b
ADP-heptose synthase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_58346_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(13010..13321)
DNA (312bp) protein (104aa)
fcl; bifunctional GDP-fucose synthetase/GDP-4-dehydro-6-deoxy-D-mannose epimerase/GDP-4-dehydro-6-L-deoxygalactose reductase (EC:1.1.1.271 5.1.3.-)
GDP-L-fucose synthase Tax=GWA2_OD1_47_10b
NAD-dependent epimerase/dehydratase id=4685431 bin=GWA2_Elusimicrobia_51_34 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Displaying 16 items

View Taxonomy