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RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_1
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..4872)
DNA (4872bp) protein (1624aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU76286.1}; Flags: Fragment;; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_2
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(5012..5692)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000313|EMBL:KKU52174.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
Ribosomal RNA small subunit methyltransferase I id=2720594 bin=GWA1_ZB2_49_26 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
putative S-adenosylmethionine-dependent methyltransferase, YraL family
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_3
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(5696..6136)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=GWA2_OD1_47_10b
hypothetical protein SclubJA_09178 id=2073028 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_4
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6174..7175
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F059C
Uncharacterized protein {ECO:0000313|EMBL:KKU76283.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_5
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(7172..7495)
DNA (324bp) protein (108aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(7521..8417)
DNA (897bp) protein (299aa)
Conserved protein Tax=GWA2_OD1_47_10b
rsgI; RsgI id=15190647 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
conserved hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_7
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8499..10319)
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=uncultured bacterium RepID=K2G5H5_9BACT
Isomerizing Glutamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:KKU76280.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011
glmS; glucosamine 6-phosphate synthetase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_8
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10349..11080)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJT7_9BACT
Multi-copper polyphenol oxidoreductase, laccase {ECO:0000313|EMBL:KKU76279.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_9
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(11084..11593)
DNA (510bp) protein (170aa)
Nuclear protein SET n=1 Tax=Leptonema illini DSM 21528 RepID=H2CC30_9LEPT
Nuclear protein SET {ECO:0000313|EMBL:KKU86395.1}; Flags: Fragment;; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
nuclear protein SET
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_10
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(11594..12067)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CY19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU86394.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(12115..12645)
DNA (531bp) protein (177aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(12664..14196)
DNA (1533bp) protein (511aa)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=uncultured bacterium RepID=K2A5Q4_9BACT
Glutamine-hydrolyzing GMP synthase Tax=GWA2_OD1_47_10b
GMP synthase, large subunit
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

14295..14555
DNA (261bp) protein (87aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(14655..15068)
DNA (414bp) protein (138aa)
Maf-like protein n=2 Tax=Bacteria RepID=V5RW60_9BACT
Maf-like protein Tax=GWA2_OD1_47_10b
Maf-like protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_15
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(15072..15554)
DNA (483bp) protein (161aa)
7,8-dihydro-8-oxoguanine triphosphatase {ECO:0000313|EMBL:KKU86389.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein id=5801887 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_16
RLO_RIF_OD1_02_44_15, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(15627..16088)
DNA (462bp) protein (154aa)
putative glyoxalase
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_02_44_15_curated
hypothetical protein id=15189203 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_17
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16110..16532)
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K1YCM7_9BACT
NTP pyrophosphohydrolase, Zn-finger domain protein {ECO:0000313|EMBL:KKR85932.1}; TaxID=1618985 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
mutT-like protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_18
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(16522..19128)
DNA (2607bp) protein (869aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKU86388.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Protein translocase subunit SecA id=1956098 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
secA; preprotein translocase subunit SecA
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_19
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(19176..19541)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU76411.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
UPI00020A96D2 related cluster id=4242127 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_20
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(19550..20491)
DNA (942bp) protein (314aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=GWA2_OD1_47_10b
UDP-N-acetylenolpyruvoylglucosamine reductase id=1930746 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_21
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

20842..22182
DNA (1341bp) protein (447aa)
Sugar transferase {ECO:0000313|EMBL:KKU86385.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sugar transferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_22
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(22157..23104)
DNA (948bp) protein (316aa)
UDP-glucose/GDP-mannose dehydrogenase dimerization {ECO:0000313|EMBL:KKU86384.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
UDP-glucose/GDP-mannose dehydrogenase dimerization id=4077955 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_23
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(23112..25235)
DNA (2124bp) protein (708aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU52155.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
hypothetical protein id=4532135 bin=GWA2_OP3_52_12 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_24
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(25342..27642)
DNA (2301bp) protein (767aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86382.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein id=4532135 bin=GWA2_OP3_52_12 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Lipid A core--O-antigen ligase-like protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_25
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(27683..29092)
DNA (1410bp) protein (470aa)
Cell wall lytic activity, endopeptidase (SpoIID/lytB) n=1 Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FZP2_BACPE
Cell wall lytic activity, endopeptidase (SpoIID/lytB) {ECO:0000313|EMBL:KKU86381.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
lytB; endopeptidase SpoIID/LytB
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_26
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(29122..29823)
DNA (702bp) protein (234aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86380.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_27
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(29989..31296)
DNA (1308bp) protein (436aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86379.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Putative membrane protein id=4545000 bin=GWF2_OP3_38_59 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_28
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

31405..32160
DNA (756bp) protein (252aa)
Methyltransferase type 11 Tax=GWA2_OD1_47_10b
hypothetical protein
type 11 methyltransferase id=2537299 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_29
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

32157..33530
DNA (1374bp) protein (458aa)
hypothetical protein Tax=GWA2_OD1_47_10b
hypothetical protein id=1251374 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_3154_30
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(33548..34471)
DNA (924bp) protein (308aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67737_AQUAE
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KKU86376.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
dmt; dolichol-phosphate mannosyltransferase
Displaying items 1-30 of 37 in total

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