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RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_1
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1..126)
-----------------
DNA (126bp)
protein (42aa)
PilE-like protein {ECO:0000313|EMBL:KKU76521.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_2
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(288..1496)
-----------------
DNA (1209bp)
protein (403aa)
Type 4 fimbrial assembly protein pilC {ECO:0000313|EMBL:KKU86435.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227297 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pilC; type 4 fimbrial assembly protein pilC
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_3
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(1509..2573)
-----------------
DNA (1065bp)
protein (355aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373007F
Twitching motility protein {ECO:0000313|EMBL:KKU86436.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
twitching motility protein PilT
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_4
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(2585..2968)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037FEA68
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KKU86437.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Two component transcriptional regulator, winged helix
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_5
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(2987..4693)
-----------------
DNA (1707bp)
protein (569aa)
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKU86438.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system protein E
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_6
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(4697..5071)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86439.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_7
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(5061..5591)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86440.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_8
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(5588..6205)
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86441.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(6210..7304)
-----------------
DNA (1095bp)
protein (365aa)
type IV pilus assembly protein PilM, partial Tax=GWA2_OD1_47_10b
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_10
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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7370..8050
-----------------
DNA (681bp)
protein (227aa)
Phosphoribosyltransferase {ECO:0000313|EMBL:KKU86443.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
amidophosphoribosyltransferase-like protein id=15190172 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative amidophosphoribosyltransferase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_11
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

8113..8352
-----------------
DNA (240bp)
protein (80aa)
Growth regulator {ECO:0000313|EMBL:KKU86444.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
AbrB/MazE/MraZ-like id=120277 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_12
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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8396..8737
-----------------
DNA (342bp)
protein (114aa)
Death on curing protein, Doc toxin n=1 Tax=uncultured bacterium A1Q1_fos_493 RepID=L7W1K3_9BACT
Death-on-curing family protein {ECO:0000313|EMBL:KKU86445.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Death-on-curing family protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_13
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8829..9920)
-----------------
DNA (1092bp)
protein (364aa)
Creatinase/Prolidase N-terminal domain protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FGF0_9BACL
Xaa-Pro dipeptidase {ECO:0000313|EMBL:KKU76534.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
Xaa-Pro dipeptidase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_14
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

9997..10818
-----------------
DNA (822bp)
protein (274aa)
Vitamin K epoxide reductase
Uncharacterized protein {ECO:0000313|EMBL:KKU86447.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein id=14424247 bin=bin11_novelCP species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=bin11_novelCP organism_group=Unknown_CP
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_15
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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10824..11543
-----------------
DNA (720bp)
protein (240aa)
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:KKU53336.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_12482_16
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(11576..12049)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0W3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKU86449.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein
Displaying 16 items

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