ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_2658_16

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_47_79

partial RP 38 / 55 MC: 1 BSCG 38 / 51 ASCG 6 / 38
Location: comp(13356..15023)

Top 3 Functional Annotations

Value Algorithm Source
gspE; general secretion pathway protein F; K02454 general secretion pathway protein E Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 556.0
  • Bit_score: 693
  • Evalue 1.90e-196
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 552.0
  • Bit_score: 522
  • Evalue 4.10e-145
PulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 544.0
  • Bit_score: 391
  • Evalue 5.20e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Giovannonibacteria_46_32 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1668
GTGGCATTCAACGAAGAGCAACAAAAGGATAAACTCGCGAGTATCAGGCGCAAAGAAGAAGAAGAGCTTGCGCTCCTCCTCTCAAAAAAATATAAAACCCCGTACCTCGACCTCTCGCGCACGTCTATCGACCCAGACGCGTTGCGGCTGGTTCCGGAGGATCGCGCGCGCGCGGCTGGTCTTGCGGTAATCCGCATCACCGGTAAAAATTTACAGGTCGCGGTCAAAAATCCAACTGCGAGCGCGATCAAAGAAACCGTTGACGAACTGCATCGAATGGGATACCAACCCCAGCTTTTTTTGGTTTCAATGCAAAGTTTGGAACGCGCATGGAGTCGCTACAAAGAACTCGGCGCTGAAACGGAAATAACCTCAAACATCATCGATATTACGCGTGTTGGGATGGAAGAATTTAAAGAACGGGTAAAAAATACAACCGACTTTCAAGAGTTTTTGAATACCAAAATATCTCTTGGCGCAACCGAACATATTACAAATCTTCTCGATATTATTCTCGCGGGCGCCTACGAACTCGAAACCTCTGACGTTCACGTAGAGCCCGCGGAAAACAAAGTGCATTTGCGCATCCGTCTTGACGGCGTGCTTCAAAATGTCACGGACGTCTCACCCAAGGCCTACAAGATGCTTCTGGCACGCATCAAACTTGTCTCGGAGCTGAAACTCAATATCCATGACCGGCCCCAGGACGGGCGGTTCACCATTCGCGCCGACGGAAAGGACGTGGAAGTGCGCGTTTCGACACTGCCGGGACCTAATGGGGAAACAATTGTTATGCGCATTCTCCATCCAAAAGCAATCGCGCTTACCTTTGAAAAACTCGGTATGCACTCGTACGTCCAGAAAATGGTTGAGCGCGAACTCCAACAGCCAAACGGCATGATTATCACCACCGGTCCCACGGGATCAGGAAAAACGACAACCCTTTACGCCTTCATAAAAAAAGTAAACCAACCGGAGATAAAAATAATTACTATCGAAGACCCGATTGAATACCATATCGAAGGCATATCGCAAACGCAAGTAGATAAAAGCGCGGGTTATACATTCGAGTCGGGCCTGTCTGCAATCATGCGCCAGGATCCTGATATTATTCTTGTCGGCGAGATTCGTAACCGGGAAACTGCCGAAATCGCTCTTCAGGCATCACTCACGGGACATTTAGTTTTTTCAACGCTTCACACAAACGATGCCCCCGGCACAATTCCCCGCCTCATTGATCTTGGCGCCCCTCCAAATATTATCGCGCCGGCAATTAATATCGCAATCGCGCAACGGCTTGTAAGAGTTCTATGCCAAACCTGTAAAAAAGAAGTGGCGGCATCCCCCGATGAACTTGCGGTCATAAAAAAAGAAATCGAATTACTTCCCAAACAGTACGACCGGCCCCCACTTGAAAATATAAAAGTTTTTGACGCGGGATCGTGCACCGCATGCAACAATACCGGCTACAAGGGTAGAATCGGCGTGTATGAGGCGTTCCTCATTACGGATGCAATAGAAAAACTTATTCTCCGGAATCCTACCGAGGCAGAGGTAAGAGAAGTTGCCGTAAGCCAGGGTATGATAACTCTAAAACAAGATGGCATCCTTAAAGTTCTCTCCGGCATCACATCCATCGCGGAACTTCAACGCGTTGTTGGATTTTAG
PROTEIN sequence
Length: 556
VAFNEEQQKDKLASIRRKEEEELALLLSKKYKTPYLDLSRTSIDPDALRLVPEDRARAAGLAVIRITGKNLQVAVKNPTASAIKETVDELHRMGYQPQLFLVSMQSLERAWSRYKELGAETEITSNIIDITRVGMEEFKERVKNTTDFQEFLNTKISLGATEHITNLLDIILAGAYELETSDVHVEPAENKVHLRIRLDGVLQNVTDVSPKAYKMLLARIKLVSELKLNIHDRPQDGRFTIRADGKDVEVRVSTLPGPNGETIVMRILHPKAIALTFEKLGMHSYVQKMVERELQQPNGMIITTGPTGSGKTTTLYAFIKKVNQPEIKIITIEDPIEYHIEGISQTQVDKSAGYTFESGLSAIMRQDPDIILVGEIRNRETAEIALQASLTGHLVFSTLHTNDAPGTIPRLIDLGAPPNIIAPAINIAIAQRLVRVLCQTCKKEVAASPDELAVIKKEIELLPKQYDRPPLENIKVFDAGSCTACNNTGYKGRIGVYEAFLITDAIEKLILRNPTEAEVREVAVSQGMITLKQDGILKVLSGITSIAELQRVVGF*