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RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2..259
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

372..1136
DNA (765bp) protein (255aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Putative uncharacterized protein id=2504034 bin=GWC1_CPR2_39_9 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1186..1395
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1594..2550)
DNA (957bp) protein (319aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2591..2758
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2823..4520)
DNA (1698bp) protein (566aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4540..4650
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_8
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(4855..5052)
DNA (198bp) protein (66aa)
Cold shock-like protein {ECO:0000313|EMBL:KKW22525.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5802143 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5249..6154)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B654EE
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_10
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6257..6445)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6647..7249)
DNA (603bp) protein (201aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
DedA family protein id=5097723 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_12
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7659..9119
DNA (1461bp) protein (487aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9186..9443)
DNA (258bp) protein (86aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Putative uncharacterized protein id=3012935 bin=GWC1_OD1_38_17 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_14
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9501..10376)
DNA (876bp) protein (292aa)
HhH-GPD; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Endonuclease III family protein n=2 Tax=Geobacter metallireducens RepID=Q39V39_GEOMG
endonuclease III family protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_15
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10388..10729)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_16
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10876..11490)
DNA (615bp) protein (205aa)
Base excision DNA repair protein, HhH-GPD family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 id=5103570 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative endoIII-related endonuclease Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Base excision DNA repair protein, HhH-GPD family
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_17
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11554..12699)
DNA (1146bp) protein (382aa)
DdlA2; D-alanine-D-alanine ligase and related ATP-grasp enzyme; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
D-alanine--D-alanine ligase id=2740766 bin=GWC1_TM7_41_48 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC1_TM7_41_48 organism_group=TM7
DdlA2; D-alanine--D-alanine ligase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_18
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(12865..14361)
DNA (1497bp) protein (499aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKW22516.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=4720211 bin=GWC2_CPR2_39_35 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
D-alanyl-D-alanine-adding enzyme
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_19
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14358..15116)
DNA (759bp) protein (253aa)
Alpha/beta hydrolase fold protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6U1T4_BACCJ
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_20
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15094..15750)
DNA (657bp) protein (219aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] id=15191430 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
phosphoglycerate mutase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_21
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15831..16061
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_22
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(16198..16719)
DNA (522bp) protein (174aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein; K07460 putative endonuclease id=5803161 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_6053_23
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(16942..17175)
DNA (234bp) protein (78aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
NUDIX hydrolase id=5227251 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 23 items

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