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RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_1
RLO_PER_ii_55_15, PER-ii, Bacteria

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2..1462
DNA (1461bp) protein (487aa)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_2
RLO_PER_ii_55_15, PER-ii, Bacteria

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comp(1459..2322)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D3X4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_3
RLO_PER_ii_55_15, PER-ii, Bacteria

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2371..3429
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI00036FD79B
dnaJ; chaperone hsp40, co-chaperone with dnak; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
dnaJ; chaperone Hsp40, co-chaperone with DnaK
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_4
RLO_PER_ii_55_15, PER-ii, Bacteria

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comp(3444..3980)
DNA (537bp) protein (179aa)
hypothetical protein; K06346 spoIIIJ-associated protein Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
jag protein; K06346 spoIIIJ-associated protein id=5093084 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
single-stranded nucleic acid binding R3H domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_5
RLO_PER_ii_55_15, PER-ii, Bacteria

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comp(4047..4328)
DNA (282bp) protein (94aa)
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
BcepMu4; HU DNA-binding protein; K03530 DNA-binding protein HU-beta id=31997 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
hupB; HU, DNA-binding transcriptional regulator subunit beta
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_6
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

4454..6817
DNA (2364bp) protein (788aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase id=2026737 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_7
RLO_PER_ii_55_15, PER-ii, Bacteria

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6919..7134
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_8
unknown

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7154..7399
DNA (246bp) protein (82aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_9
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

7396..8550
DNA (1155bp) protein (385aa)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_10
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

8749..9519
DNA (771bp) protein (257aa)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_11
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

9516..9866
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_15497_12
RLO_PER_ii_55_15, PER-ii, Bacteria

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comp(9753..10568)
DNA (816bp) protein (272aa)
membrane-bound metallopeptidase Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
peptidase M23B id=5802727 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
lipoprotein
Displaying 12 items

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