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RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_1
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists

100..3147
DNA (3048bp) protein (1016aa)
cell wall/surface repeat protein Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
Cell wall/surface repeat protein id=3461699 bin=GWF2_OP3_38_59 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
cell wall/surface repeat protein
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_2
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(3168..4448)
DNA (1281bp) protein (427aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5098143 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_3
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(4459..4923)
DNA (465bp) protein (155aa)
50S ribosomal protein L15 n=1 Tax=Mycoplasma arginini 7264 RepID=N9VCK0_MYCAR
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplO; 50S ribosomal protein L15
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_4
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(4928..5449)
DNA (522bp) protein (174aa)
SSU ribosomal protein S5P Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5802080 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
SSU ribosomal protein S5P
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_5
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(5464..5808)
DNA (345bp) protein (115aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=84660 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
50S ribosomal protein L18
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_6
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(5849..6403)
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5W0_THEAS
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
50S ribosomal protein L6
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_7
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(6456..6842)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZW4_9BACT
SSU ribosomal protein S8P Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
SSU ribosomal protein S8P
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_8
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(7075..7620)
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=RL5_THEM4
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplE; 50S ribosomal protein L5
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_9
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(7626..8156)
DNA (531bp) protein (177aa)
50S ribosomal protein L24 n=1 Tax=Clostridium sp. CAG:417 RepID=R6SX55_9CLOT
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplX; 50S ribosomal protein L24
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_10
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(8190..8558)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI21_CLOAI id=73161 bin=ACD51 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplN; 50S ribosomal protein L14
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_11
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(8555..8863)
DNA (309bp) protein (103aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=718856 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_12
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(8881..9327)
DNA (447bp) protein (149aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5093043 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_13
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(9320..9988)
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU85_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_14
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(10023..10355)
DNA (333bp) protein (111aa)
50S ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=98625 bin=ACD65 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_15
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(10352..10696)
DNA (345bp) protein (115aa)
ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5098128 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S19
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_16
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(10717..11565)
DNA (849bp) protein (283aa)
50S ribosomal protein L2 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y3Q2_ANEAE
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_17
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(11584..11883)
DNA (300bp) protein (100aa)
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 id=124612 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
50S ribosomal protein L23
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_18
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(11885..12514)
DNA (630bp) protein (210aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5093037 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L4
RIFCSPLOWO2_01_FULL_OD1_54_110_rifcsplowo2_01_scaffold_16746_19
RLO_PER_ii_55_15, PER-ii, Bacteria

Not on your lists


comp(12609..13217)
DNA (609bp) protein (203aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_PER_ii_55_15_curated
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5090908 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
50S ribosomal protein L3
Displaying 19 items

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