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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..621)
DNA (621bp) protein (207aa)
3-ketoacyl-ACP synthase I (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWD2_Deltaproteobacteria_55_8_curated
3-oxoacyl-(Acyl-carrier-protein) synthase III id=1904928 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative acyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(848..1543)
DNA (696bp) protein (232aa)
Cyclic nucleotide-binding:Bacterial regulatory protein, Crp id=1904924 bin=GWD2_Deltaproteobacteria_55_8 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cyclic nucleotide-binding regulatory protein Crp; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
cyclic nucleotide-binding regulatory protein Crp
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1627..3330)
DNA (1704bp) protein (568aa)
ABC transporter; K03688 ubiquinone biosynthesis protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC transporter id=1904920 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3347..3652)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative uncharacterized protein id=1904916 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4000..4992)
DNA (993bp) protein (331aa)
sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) (EC:1.1.1.170) Tax=GWD2_Deltaproteobacteria_55_8_curated
sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) (EC:1.1.1.170)
3-beta-hydroxysteroid dehydrogenase id=1904911 bin=GWD2_Deltaproteobacteria_55_8 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4989..6728)
DNA (1740bp) protein (580aa)
AMP-dependent synthetase and ligase id=1904905 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptide synthase Tax=GWD2_Deltaproteobacteria_55_8_curated
peptide synthase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6793..7671)
DNA (879bp) protein (293aa)
alpha/beta hydrolase; K01563 haloalkane dehalogenase [EC:3.8.1.5] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Putative uncharacterized protein id=1904899 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta hydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7716..8210)
DNA (495bp) protein (165aa)
id=1904898 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1904898 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1747_trna_1
unknown

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comp(8245..8318)
DNA (74bp)
transferRNA
Displaying 9 items

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