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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_1
unknown

Not on your lists

3..524
DNA (522bp) protein (174aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(521..1621)
DNA (1101bp) protein (367aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY53_9BACT
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1646..2626)
DNA (981bp) protein (327aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2153500 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2717..3334)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J8_9ZZZZ
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
NIPSNAP family containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3444..3665
DNA (222bp) protein (74aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
aldo/keto reductase id=14424524 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3751..4569)
DNA (819bp) protein (273aa)
Polysaccharide deacetylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DG7_POLSJ
polysaccharide deacetylase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
polysaccharide deacetylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5012..5956)
DNA (945bp) protein (315aa)
oxidoreductase (EC:1.-.-.-) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
oxidoreductase (EC:1.-.-.-)
aldo/keto reductase id=14426487 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin1_lowGC organism_group=Unknown_CP
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6038..7264)
DNA (1227bp) protein (409aa)
Transmembrane efflux protein (MFS) n=1 Tax=Brevibacterium casei S18 RepID=K9ARM9_9MICO
pmrA; multidrug resistance efflux pump Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..8386)
DNA (1068bp) protein (356aa)
Peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Peptide chain release factor 2 id=4511042 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Peptide chain release factor 2
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8504..8959)
DNA (456bp) protein (152aa)
Probable rRNA maturation factor id=1763883 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K07042 probable rRNA maturation factor Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9299..11512
DNA (2214bp) protein (738aa)
icl2; isocitrate lyase (EC:4.1.3.1) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
icl2; isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase id=1763899 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11681..13861
DNA (2181bp) protein (727aa)
malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
malate synthase G (EC:2.3.3.9)
Malate synthase G id=1763900 bin=GWD2_Deltaproteobacteria_55_8 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13903..14910)
DNA (1008bp) protein (336aa)
PhoH family protein id=1763901 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=GWD2_Deltaproteobacteria_55_8_curated
PhoH family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..15359)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative uncharacterized protein id=1763902 bin=GWD2_Deltaproteobacteria_55_8 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15356..18007)
DNA (2652bp) protein (884aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Alanine--tRNA ligase id=1763903 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alaS; alanyl-tRNA ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_353_16
unknown

Not on your lists

comp(18023..18160)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 16 items

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