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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(253..921)
DNA (669bp) protein (223aa)
Integrase, catalytic region n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJC0_9BACT
integrase, catalytic region
Integrase, catalytic region {ECO:0000313|EMBL:CBE67485.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(896..1414)
DNA (519bp) protein (173aa)
Integrase catalytic region n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQX5_MYXFH
integrase catalytic subunit Tax=RBG_16_Nitrospirae_64_22_curated
integrase catalytic subunit
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1414..1821)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEP1_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27187.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2316..2543
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000366588E
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2721..3170
DNA (450bp) protein (150aa)
cytoplasmic protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Hypothetical cytosolic protein id=1940978 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytoplasmic protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3252..3761
DNA (510bp) protein (170aa)
Uncharacterized protein id=1940974 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tRNA/helicase-type nucleic acid binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
OB-fold tRNA/helicase-type nucleic acid binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3815..4573
DNA (759bp) protein (253aa)
Carboxymethylenebutenolidase id=1940970 bin=GWD2_Deltaproteobacteria_55_8 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dienelactone hydrolase-like enzyme Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
dienelactone hydrolase-like enzyme
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4645..4932
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=1940965 bin=GWD2_Deltaproteobacteria_55_8 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4971..5225
DNA (255bp) protein (85aa)
id=1940964 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1940964 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5270..5869
DNA (600bp) protein (200aa)
Methyltransferase domain protein id=1940961 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Methyltransferase domain protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5955..7202
DNA (1248bp) protein (416aa)
id=1940959 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1940959 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7299..7682
DNA (384bp) protein (128aa)
Two-component response regulator id=1940955 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative two-component sensor protein/histidine protein kinase Tax=GWD2_Deltaproteobacteria_55_8_curated
PAS domain S-box
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7975..9042
DNA (1068bp) protein (356aa)
Carbon-nitrogen hydrolase family protein id=1940953 bin=GWD2_Deltaproteobacteria_55_8 species=Sphingomonas sp. S17 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=GWD2_Deltaproteobacteria_55_8_curated
aliphatic nitrilase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9079..10071)
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
id=1940952 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10271..11524
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 id=1940937 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily MFS_1 Tax=GWD2_Deltaproteobacteria_55_8_curated
major facilitator superfamily MFS_1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11629..12696
DNA (1068bp) protein (356aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase id=1940935 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12693..14054
DNA (1362bp) protein (454aa)
id=1940934 Tax=RBG_16_Deltaproteobacteria_47_11_curated
id=1940934 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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14119..15582
DNA (1464bp) protein (488aa)
pyruvate carboxylase (EC:6.4.1.1)
pyruvate carboxylase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Oxaloacetate decarboxylase id=2113537 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15613..16563
DNA (951bp) protein (317aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein id=14625737 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Luciferase-like, subgroup
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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16681..16980
DNA (300bp) protein (100aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein id=1242751 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17011..17295
DNA (285bp) protein (95aa)
MazF family transcriptional regulator; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Hypothetical conserved protein id=3707660 bin=GWC2_OP3_44_8 species=uncultured marine microorganism HF4000_APKG5H11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1411_22
unknown

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17315..17389
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 22 items

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