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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..681)
DNA (681bp) protein (227aa)
NADH:flavin oxidoreductase id=1852502 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NADH:flavin oxidoreductase Tax=GWD2_Deltaproteobacteria_55_8_curated
NADH:flavin oxidoreductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

914..1210
DNA (297bp) protein (99aa)
Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1542..3818
DNA (2277bp) protein (759aa)
dehydrogenase; K00087 xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative dehydrogenase (EC:1.17.1.4)
Dehydrogenase id=1852503 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3820..4707
DNA (888bp) protein (296aa)
CoxM; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curat
Putative molybdopterin dehydrogenase FAD-binding domain protein (Fragment) id=1852505 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CoxM; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4704..5177
DNA (474bp) protein (158aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=1852507 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=GWD2_Deltaproteobacteria_55_8_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(5198..5440)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI000365E3C1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5505..5729)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UR21_ROSS1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_8
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5838..6011)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYX8_9GAMM
hypothetical protein Tax=CG_Desulfob_01
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_9
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6008..6481)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JHT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ11890.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..7129)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000313AE9E
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7195..8403)
DNA (1209bp) protein (403aa)
FAD dependent oxidoreductase; K00109 2-hydroxyglutarate dehydrogenase [EC:1.1.99.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative oxidoreductase id=3696600 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8469..9482)
DNA (1014bp) protein (338aa)
zinc-binding alcohol dehydrogenase (EC:1.1.1.1); K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
zinc-binding alcohol dehydrogenase (EC:1.1.1.1)
Zinc-binding alcohol dehydrogenase family protein id=1842204 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9509..10132)
DNA (624bp) protein (208aa)
Uncharacterized protein id=1842205 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10129..10593)
DNA (465bp) protein (155aa)
ABC transporter, periplasmic substrate-binding protein, MCE family id=1842206 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mce-like protein; K02067 putative ABC transport system substrate-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ABC transporter substrate-binding lipoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10603..11349)
DNA (747bp) protein (249aa)
ABC transporter related protein id=1842207 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
organic solvent tolerance ABC transporter ATP-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11384..12154)
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=1842208 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC transporter permease
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..12967
DNA (762bp) protein (254aa)
methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
methyltransferase (EC:2.1.1.-)
Methyltransferase id=1842210 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12974..13432)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=1842212 bin=GWD2_Deltaproteobacteria_55_8 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative RNA-binding protein containing Zn ribbon Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13860..16619
DNA (2760bp) protein (920aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) id=1842214 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16658..16987
DNA (330bp) protein (110aa)
id=1842216 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1842216 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_21
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17005..17703)
DNA (699bp) protein (233aa)
Uncharacterized protein id=1842218 bin=GWD2_Deltaproteobacteria_55_8 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative peptidase A2A Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17927..18196
DNA (270bp) protein (90aa)
30S ribosomal protein S15 id=1842219 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S15
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_23
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18266..20410
DNA (2145bp) protein (715aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4554263 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_24
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20428..21693
DNA (1266bp) protein (422aa)
Zinc-dependent peptidase, M16 family id=1842225 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
zinc-dependent peptidase, PqqL family Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
zinc-dependent peptidase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_25
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21784..22236
DNA (453bp) protein (151aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=GWD2_Deltaproteobacteria_55_8_curated
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=1842263 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_26
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22323..23615
DNA (1293bp) protein (431aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=GWD2_Deltaproteobacteria_55_8_curated
Adenylosuccinate lyase id=1842266 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
adenylosuccinate lyase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23657..23899
DNA (243bp) protein (81aa)
purS; phosphoribosylformylglycinamidine synthase subunit PurS (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5B1_9BACI
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_28
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24048..24764
DNA (717bp) protein (239aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIT5_9BACT
phosphoribosylformylglycinamidine synthase I
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24752..26995
DNA (2244bp) protein (748aa)
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=14425020 bin=bin1_lowGC species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
purL; phosphoribosylformylglycinamidine synthase subunit PurL (EC:6.3.5.3)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_139_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27059..28483
DNA (1425bp) protein (475aa)
purF; glutamine--phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
purF; glutamine--phosphoribosylpyrophosphate amidotransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] id=14425021 bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
amidophosphoribosyltransferase
Displaying items 1-30 of 32 in total

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