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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(378..722)
DNA (345bp) protein (115aa)
type III restriction enzyme, res subunit Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Type III restriction protein res subunit id=3472451 bin=GWA2_Elusimicrobia_56_46 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_2
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(799..1110)
DNA (312bp) protein (104aa)
hypothetical protein id=24503716 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_13_RIF03_48_7_curated
conserved protein of unknown function [Helix-turn-helix type 3 domain]
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1203..2645)
DNA (1443bp) protein (481aa)
Amidohydrolase id=1757965 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
amidohydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3620)
DNA (960bp) protein (320aa)
Putative UDP-glucose 4-epimerase id=1757962 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase Tax=GWD2_Deltaproteobacteria_55_8_curated
NAD-dependent epimerase/dehydratase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3666..4775)
DNA (1110bp) protein (370aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=GWD2_Deltaproteobacteria_55_8_curated
YqhT protein id=1757958 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M24
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4803..5843)
DNA (1041bp) protein (347aa)
GTP-binding protein YchF; K06942 Tax=GWD2_Deltaproteobacteria_55_8_curated
GTP-binding protein YchF id=1757956 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTP-binding protein YchF
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5865..6815)
DNA (951bp) protein (317aa)
id=1757944 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1757944 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6923..8836)
DNA (1914bp) protein (638aa)
guanylate cyclase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative Adenylate cyclase id=1757941 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
guanylate cyclase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8824..9495)
DNA (672bp) protein (224aa)
TenA family transcriptional regulator (EC:3.5.99.2); K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
TenA family transcriptional regulator (EC:3.5.99.2)
Thiamine biosynthesis protein id=1757938 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_10
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9661..10128
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=GWD2_Deltaproteobacteria_55_8_curated
(2Fe-2S)-binding domain protein id=1757936 bin=GWD2_Deltaproteobacteria_55_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
(2Fe-2S)-binding domain protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_739_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10139..10915
DNA (777bp) protein (259aa)
nicotine dehydrogenase chain A; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Nicotine dehydrogenase chain A id=1757934 bin=GWD2_Deltaproteobacteria_55_8 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nicotine dehydrogenase chain A
Displaying 11 items

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