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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..792
DNA (792bp) protein (264aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2153530 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(864..1445)
DNA (582bp) protein (194aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein id=1997010 bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1757..2764
DNA (1008bp) protein (336aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2153530 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2989..3654)
DNA (666bp) protein (222aa)
glutathione S-transferase id=14426020 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
glutathione S-transferase Tax=CSP1_2_Dadabacteria
glutathione S-transferase domain-containing protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3674..5620)
DNA (1947bp) protein (649aa)
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
AMP-dependent synthetase and ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7F2_SPHTD
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5650..6945)
DNA (1296bp) protein (432aa)
5-nitroanthranilic acid aminohydrolase n=1 Tax=Bradyrhizobium sp. RepID=NAAA_BRASZ
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6979..7944)
DNA (966bp) protein (322aa)
Luciferase-like, subgroup n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Q7_CONWI
luciferase-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
luciferase-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7963..9339)
DNA (1377bp) protein (459aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
dihydroorotase n=1 Tax=Agromyces subbeticus RepID=UPI0003B3DE0C
amidohydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..9764)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035F0774
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9963..10976)
DNA (1014bp) protein (338aa)
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Extracellular solute-binding protein family 1 id=1937571 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11034..11288
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11294..12271)
DNA (978bp) protein (326aa)
porphobilinogen synthase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase id=4717295 bin=GWC2_Nitrospirae-rel_56_14 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..13175)
DNA (816bp) protein (272aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Uroporphyrinogen-III C-methyltransferase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F8I7_9DELT
uroporphyrin-III C-methyltransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13274..14191)
DNA (918bp) protein (306aa)
hemC; porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Porphobilinogen deaminase id=1953459 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hemC; porphobilinogen deaminase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14313..15596)
DNA (1284bp) protein (428aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=GWD2_Deltaproteobacteria_55_8_curated
Glutamyl-tRNA reductase id=1953457 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutamyl-tRNA reductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15600..16421)
DNA (822bp) protein (274aa)
ResC/HemX-like cytochrome c biogenesis membrane protein id=1953455 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome c biogenesis protein Tax=GWD2_Deltaproteobacteria_55_8_curated
ResC/HemX-like cytochrome c biogenesis membrane protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_746_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16624..17157)
DNA (534bp) protein (178aa)
Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic id=1953453 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Lytic transglycosylase catalytic Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
lytic transglycosylase
Displaying 17 items

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