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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..285
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Putative uncharacterized protein id=4923731 bin=GWC2_Deltaproteobacteria_42_51 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

406..3936
DNA (3531bp) protein (1177aa)
dnaE; DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
DNA polymerase III, alpha subunit n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A586_PELCD
dnaE-1; DNA polymerase III subunit alpha
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3943..5217
DNA (1275bp) protein (425aa)
GTPase HflX n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIJ0_DESK7
GTP-binding protein HflX; K03665 GTP-binding protein HflX Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
GTP-binding protein HflX
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5777
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFOXYA2_FULL_Deltaproteobac
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=3953885 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_trna_1
unknown

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5846..5917
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6132..8042
DNA (1911bp) protein (637aa)
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Threonine--tRNA ligase id=2049408 bin=GWD2_Deltaproteobacteria_55_8 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
threonyl-tRNA synthetase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8184..8606
DNA (423bp) protein (141aa)
Translation initiation factor IF-3 id=2049411 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
infC; translation initiation factor IF-3
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9008..9367
DNA (360bp) protein (120aa)
50S ribosomal protein L20 id=2049414 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=GWD2_Deltaproteobacteria_55_8_curated
rplT; 50S ribosomal protein L20
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9388..10434
DNA (1047bp) protein (349aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=GWD2_Deltaproteobacteria_55_8_curated
Phenylalanine--tRNA ligase alpha subunit id=2049417 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pheS; phenylalanyl-tRNA synthetase subunit alpha
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..12532
DNA (2091bp) protein (697aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Phenylalanine--tRNA ligase beta subunit id=2049422 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phenylalanyl-tRNA synthetase subunit beta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12564..12848
DNA (285bp) protein (95aa)
Integration host factor subunit alpha n=1 Tax=uncultured bacterium RepID=K1Z7D0_9BACT
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
histone family protein DNA-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12863..13216
DNA (354bp) protein (118aa)
putative transcriptional regulator Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Transcriptional regulator, MerR family id=4430652 bin=GWA2_Deltaproteo_65_63 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
MerR family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_trna_2
unknown

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13349..13422
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13386..14102
DNA (717bp) protein (239aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHC2_DESAR
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_378_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14213..14761
DNA (549bp) protein (183aa)
peptidase M23B Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
peptidase M23B id=14429461 bin=bin3_NC10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
peptidase M23B
Displaying 15 items

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