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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1178)
DNA (1176bp) protein (392aa)
membrane-bound serine protease (ClpP class) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Nodulation efficiency protein NfeD id=2030600 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
membrane-bound serine protease (ClpP class)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1123..1884)
DNA (762bp) protein (254aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=GWD2_Deltaproteobacteria_55_8_curated
Phage SPO1 DNA polymerase-related protein id=2030601 bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phage SPO1 DNA polymerase-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1990..2532)
DNA (543bp) protein (181aa)
Putative uncharacterized protein id=2030602 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2603..3823)
DNA (1221bp) protein (407aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.3
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase id=2030603 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphopantothenoylcysteine decarboxylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4160..5020
DNA (861bp) protein (287aa)
Putative lipoprotein id=2030604 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipoprotein Tax=GWD2_Deltaproteobacteria_55_8_curated
lipoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5036..6145
DNA (1110bp) protein (370aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=GWD2_Deltaproteobacteria_55_8_curated
Deoxyhypusine synthase id=2030605 bin=GWD2_Deltaproteobacteria_55_8 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
deoxyhypusine synthase-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7411..7722
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEC8_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7937..9160
DNA (1224bp) protein (408aa)
Slt family transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Lytic transglycosylase, catalytic id=4623132 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
lytic transglycosylase, SLT, LysM and LysM domain-containing
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9146..10459)
DNA (1314bp) protein (438aa)
citrate synthase I; K01647 citrate synthase [EC:2.3.3.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
gltA; citrate synthase (EC:2.3.3.1) id=14430702 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..10993)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA4_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11095..11823
DNA (729bp) protein (243aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Phosphate-transporting ATPase id=14625833 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11951..12808
DNA (858bp) protein (286aa)
gltB1; protein GltB1 (EC:1.4.1.13); K10001 glutamate/aspartate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
gltB1; protein GltB1 (EC:1.4.1.13)
GltI id=3859487 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12907..13632
DNA (726bp) protein (242aa)
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
GltJ1 id=2259318 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltJ1; protein GltJ1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13635..14312
DNA (678bp) protein (226aa)
polar amino acid ABC transporter inner membrane protein; K02029 polar amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Polar amino acid ABC transporter, inner membrane subunit id=3859484 bin=GWF2_Methylomirabilis_70_14 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polar amino acid ABC transporter inner membrane protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14438..15907
DNA (1470bp) protein (490aa)
Aldehyde dehydrogenase id=2116195 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde dehydrogenase, thermostable Tax=GWD2_Deltaproteobacteria_55_8_curated
aldehyde dehydrogenase, thermostable
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15981..16379)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase id=2116196 bin=GWD2_Deltaproteobacteria_55_8 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16405..17145)
DNA (741bp) protein (247aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=GWD2_Deltaproteobacteria_55_8_curated
Predicted phosphatase id=2116199 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphatase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17173..18192
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=2116203 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_370_19
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18336..18644)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS42_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE11778.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotr
Displaying 19 items

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