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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_1
unknown

Not on your lists

2..130
DNA (129bp) protein (43aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

419..679
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3U9_AZOL4
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_3
unknown

Not on your lists

comp(690..1034)
DNA (345bp) protein (115aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1110..2126)
DNA (1017bp) protein (339aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PT08_DESSD
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2318..3082)
DNA (765bp) protein (255aa)
A rare lipoprotein A id=1973271 bin=GWD2_Deltaproteobacteria_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rlpA; A rare lipoprotein A precursor Tax=GWD2_Deltaproteobacteria_55_8_curated
rlpA; A rare lipoprotein A precursor
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3086..4840)
DNA (1755bp) protein (585aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWD2_Deltaproteobacteria_55_8_curated
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase id=1973276 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4970..5851)
DNA (882bp) protein (294aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=GWD2_Deltaproteobacteria_55_8_curated
Tartronate semialdehyde reductase id=1973279 bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
6-phosphogluconate dehydrogenase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5977..6987
DNA (1011bp) protein (337aa)
putative ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Iron-binding periplasmic protein id=1973282 bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7030..8496)
DNA (1467bp) protein (489aa)
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79) Tax=GWD2_Deltaproteobacteria_55_8_curated
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase id=1973285 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8510..8875)
DNA (366bp) protein (122aa)
Anti-ECFsigma factor, ChrR Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Anti-ECFsigma factor, ChrR id=1973288 bin=GWD2_Deltaproteobacteria_55_8 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9310..10254
DNA (945bp) protein (315aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein id=14425017 bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transposase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10974..11681
DNA (708bp) protein (236aa)
import inner membrane translocase subunit Tim44 Tax=GWD2_Deltaproteobacteria_55_8_curated
Import inner membrane translocase, subunit Tim44 id=2042422 bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
import inner membrane translocase subunit Tim44
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11685..12170)
DNA (486bp) protein (162aa)
50S ribosomal protein L17 id=2042471 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=GWD2_Deltaproteobacteria_55_8_curated
50S ribosomal protein L17
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12174..13193)
DNA (1020bp) protein (340aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUB7_GEOS8
DNA-directed RNA polymerase subunit alpha
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13219..13845)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=RS4_PELPD
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
rpsD; 30S ribosomal protein S4
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13857..14303)
DNA (447bp) protein (149aa)
30S ribosomal protein S11 id=2042487 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S11
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14385..14768)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 id=2042490 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=GWD2_Deltaproteobacteria_55_8_curated
rpsM; 30S ribosomal protein S13
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14821..14934)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZW7_9BACT
LSU ribosomal protein L36P Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
LSU ribosomal protein L36P
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14950..15168)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 id=2042493 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
translation initiation factor 1; K02518 translation initiation factor IF-1 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
infA; translation initiation factor IF-1
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15237..15995)
DNA (759bp) protein (253aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=GWD2_Deltaproteobacteria_55_8_curated
Methionine aminopeptidase id=2042496 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
methionine aminopeptidase, type I
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15992..16657)
DNA (666bp) protein (222aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
adenylate kinase (EC:2.7.4.3)
Adenylate kinase id=2042499 bin=GWD2_Deltaproteobacteria_55_8 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16671..17981)
DNA (1311bp) protein (437aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Protein translocase subunit SecY id=2042502 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
secY; preprotein translocase subunit SecY
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_23
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17974..18264)
DNA (291bp) protein (97aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L15 id=2042506 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplO; 50S ribosomal protein L15
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_24
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18432..18929)
DNA (498bp) protein (166aa)
30S ribosomal protein S5 id=2042508 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWD2_Deltaproteobacteria_55_8_curated
rpsE; 30S ribosomal protein S5
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_25
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18946..19311)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 id=2042510 bin=GWD2_Deltaproteobacteria_55_8 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L18P; K02881 large subunit ribosomal protein L18 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L18P
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_26
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19326..19877)
DNA (552bp) protein (184aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L6 id=2042512 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplF; 50S ribosomal protein L6
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_27
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19898..20302)
DNA (405bp) protein (135aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S8 id=2042514 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S8
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_28
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20518..21057)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 id=2042515 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L5
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_29
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21070..21381)
DNA (312bp) protein (104aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
50S ribosomal protein L24 id=2042516 bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L24
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_34_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21415..21783)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=2042517 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
rplN; 50S ribosomal protein L14
Displaying items 1-30 of 60 in total

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