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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..631)
-----------------
DNA (630bp)
protein (210aa)
universal stress protein family protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Universal stress protein family protein id=4925430 bin=GWC2_Deltaproteobacteria_42_51 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
universal stress protein family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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844..1077
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1121..1786)
-----------------
DNA (666bp)
protein (222aa)
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Iron (Metal) dependent repressor, DtxR family id=4169028 bin=GWC2_Methylomirabilis_70_16 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DtxR family iron (metal) dependent repressor
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1928..2872
-----------------
DNA (945bp)
protein (315aa)
Phosphonate ABC transporter substrate-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9F6_9ARCH
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; K02044 phosphonate transport system substrate-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
phosphonate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2878..3618
-----------------
DNA (741bp)
protein (247aa)
ABC-type phosphate/phosphonate transport system, ATPase component {ECO:0000313|EMBL:KCZ70851.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KCZ70851.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicro
ABC-type phosphate/phosphonate transport system, ATPase component n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RX19_CENSY
ABC-type phosphate/phosphonate transport system, ATPase component
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_6
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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3615..4376
-----------------
DNA (762bp)
protein (254aa)
Phosphonate ABC transporter permese n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9F4_9ARCH
ABC-type phosphate/phosphonate transport system, permease component; K02042 phosphonate transport system permease protein Tax=RBG_16_Chloroflexi_56_8_curated
phosphonate ABC transporter permese
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4506..4982)
-----------------
DNA (477bp)
protein (159aa)
Bacterioferritin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEV4_9BACT
bfr; bacterioferritin iron storage homoprotein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
bfr; bacterioferritin iron storage homoprotein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5110..5526)
-----------------
DNA (417bp)
protein (139aa)
yabD; Mg-dependent DNAse; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
tatD; TatD family deoxyribonuclease (EC:3.1.21.-)
Hydrolase, TatD family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT0_9FIRM
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5496..5909)
-----------------
DNA (414bp)
protein (138aa)
yabD; Mg-dependent DNAse; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Hydrolase, TatD family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021Q0_SOLUE
TatD family hydrolase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5924..7468)
-----------------
DNA (1545bp)
protein (515aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUB6_SYNAS
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7468..8454)
-----------------
DNA (987bp)
protein (329aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2K6_GEOLS
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8530..9177)
-----------------
DNA (648bp)
protein (216aa)
dTMP kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
dTMP kinase (EC:2.7.4.9)
Thymidylate kinase id=2038207 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9281..9664)
-----------------
DNA (384bp)
protein (128aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Tax=GWD2_Deltaproteobacteria_55_8_curated
Response regulator id=2038205 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2581_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9674..11446)
-----------------
DNA (1773bp)
protein (591aa)
putative hybrid histidine kinase (EC:2.7.13.3) Tax=GWD2_Deltaproteobacteria_55_8_curated
Two-component hybrid sensor and regulator id=2038203 bin=GWD2_Deltaproteobacteria_55_8 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
Displaying 14 items

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