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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..203)
DNA (201bp) protein (67aa)
coxL; carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain {ECO:0000313|EMBL:ACI98494.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ACI98494.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
Carbon monoxide dehydrogenase large chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISQ8_RHOCS
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(200..694)
DNA (495bp) protein (165aa)
carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) (EC:1.2.99.2)
Carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) {ECO:0000313|EMBL:ACM06593.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ACM06593.1};; TaxID=309801 species="Bacteria; Chloroflexi;
Carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4R2_THERP
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(691..1587)
DNA (897bp) protein (299aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carbon-monoxide dehydrogenase id=4915855 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin dehydrogenase FAD-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_4
unknown

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2190..2501
DNA (312bp) protein (104aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_5
unknown

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2505..2753
DNA (249bp) protein (83aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_6
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2769..3608)
DNA (840bp) protein (280aa)
3-oxoadipate enol-lactonase n=1 Tax=Rhodococcus sp. R1101 RepID=UPI00031F44F2
3-oxoadipate enol-lactonase
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:AHD21643.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_7
unknown

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comp(3605..4003)
DNA (399bp) protein (133aa)

This feature has no annotations

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4137..4784)
DNA (648bp) protein (216aa)
Nitroreductase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
nitroreductase id=1241781 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nitroreductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4875..5885)
DNA (1011bp) protein (337aa)
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pyruvate ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] id=24466814 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(5896..7143)
DNA (1248bp) protein (416aa)
pyruvate ferredoxin oxidoreductase subunit alpha; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] id=24466813 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pyruvate ferredoxin oxidoreductase subunit alpha; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_11
CSP1_5_NC10, NC10, Bacteria

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comp(7303..8445)
DNA (1143bp) protein (381aa)
2-oxoacid:acceptor oxidoreductase subunit delta id=14430419 bin=bin3_NC10 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
2-oxoacid:acceptor oxidoreductase subunit delta Tax=CSP1_5_NC10
2-oxoacid:acceptor oxidoreductase subunit delta
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8442..9272)
DNA (831bp) protein (277aa)
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9395..10627)
DNA (1233bp) protein (411aa)
major facilitator superfamily protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Transporter, major facilitator family protein id=1735167 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrosopumilus salaria genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
arabinose efflux permease family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_5247_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10741..11124)
DNA (384bp) protein (128aa)
Alpha/beta hydrolase fold protein id=1735156 bin=GWD2_Deltaproteobacteria_55_8 species=Bhargavaea cecembensis genus=Bhargavaea taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hydrolase Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 14 items

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