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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1348)
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YN11_9BACT
mpl; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1341..2471)
DNA (1131bp) protein (377aa)
Beta-lactamase id=2005024 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
beta-lactamase Tax=GWD2_Deltaproteobacteria_55_8_curated
beta-lactamase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2489..3400)
DNA (912bp) protein (304aa)
peptidase U61, LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=GWD2_Deltaproteobacteria_55_8_curated
Muramoyltetrapeptide carboxypeptidase id=2005027 bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase U61, LD-carboxypeptidase A
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3708..3983
DNA (276bp) protein (92aa)
id=2005029 Tax=GWD2_Deltaproteobacteria_55_8_curated
id=2005029 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3980..4255
DNA (276bp) protein (92aa)
Uncharacterized protein-like protein id=2005030 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWD2_Deltaproteobacteria_55_8_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4465..4755
DNA (291bp) protein (97aa)
10 kDa chaperonin id=2005034 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=GWD2_Deltaproteobacteria_55_8_curated
groES; co-chaperonin GroES
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4782..6431
DNA (1650bp) protein (550aa)
60 kDa chaperonin 2 id=2005039 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
groEL; molecular chaperone GroEL
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6574..7914
DNA (1341bp) protein (447aa)
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=14425484 bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ffh; signal recognition particle protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7934..8182
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L7S3_9BACI
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
30S ribosomal protein S16
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8277..8513
DNA (237bp) protein (79aa)
UPF0109 protein Dthio_PD1343 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6STI8_9DELT
hypothetical protein; K06960 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_1121_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8535..8852
DNA (318bp) protein (106aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium ultunense Esp RepID=M1YP86_9CLOT
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWD2_Deltaproteobacteria_55_8_curated
16S rRNA processing protein RimM
Displaying 11 items

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